Abstract

We have seen a swing toward metabolic engineering approaches as the solution to problems. I think the pendulum will continue to swing away from where industrial biotechnology was 25 years ago, which was more process-based solutions–reactors, fermenters, separations, for example. One of the challenges is that even though there have been huge successes with the biology-based approaches, when it comes to being part of a bioeconomy, these have to be tested and put to scale. If you rely only on the metabolic engineering side of things without linking it to the process, separations, and logistics side, you are going to stumble later in the process rather than earlier.
The core of innovation will derive from the ability to manipulate biology. During the next decade more innovations will continue to come from that side, rather than from the process side, although advances in areas such as immobilization and membrane separation, for example, will be essential for implementing the technologies and bringing them into the market.
Another thing the industry needs to do is to continue trying a wider number of ideas. Most new ideas do not successfully advance into commercial practice; we know this from the venture capital industry. One of the challenges for industrial biotechnology in this regard is that most of the research dollars come from the government, and the government is increasingly risk-averse. Can you imagine selling to Congress a proposal in which you expect half of the things you are going to try to fail, in the hopes of achieving one huge success, as is the norm in the venture capital industry?
I think one of the main challenges for the industrial biotechnology community remains in the interfaces between the biology side and the process side; between new tools and techniques in genetic engineering, synthetic and systems biology, and computational resources for large data management, and linking that into how it helps you move something forward and succeed. I think we have shown that many of these things can work in principle–we have shown proof of concept–but then moving further across what is sometimes called “the valley of death” remains a challenge. We have learned from the drug and pharma side that we need to be able to identify barriers earlier.
We also face other challenges in the biofuels, bioproducts, and renewables areas in terms of stability. We talked about financing risk, but there is also policy instability, which adds another layer of risk. For example, will the rules on the Renewable Fuels Standard (RFS) change this year, next year, in 2 years, or 5 years? As a community, we need to be realistic about risk and communicate risk, even while remaining optimistic. As researchers, we are supposed to take risks and to try things that have not been tried before.
In terms of negatives, one challenge of being in research in this area is the increasing push on publish or perish. Therefore, while industry, national laboratories, and sponsors see the value of “team science,” this is not always recognized in university tenure committees. Another is what I described previously as an increasing aversion to risk, encompassing both the cost and time to try exploratory ideas. I think we need to try more ideas, with the hope of finding something successful or failing early. But either the funding needs to be available to do that, or there needs to be the slack in time and schedules to allow researchers to do that on the side, and there is less and less of that slack in every part of the research system these days.
I am an advocate for renewable bioenergy and bioproducts, even though there is ongoing debate. Although there are some valid reasons for the debate, my response is that renewable solutions are still better than many of the alternatives. We know there are ways we can grow biofeedstocks unsustainably and there are ways we can grow them more sustainably. With more knowledge we need to help society move forward with good strategies and not let purely economic drivers push things into bad strategies in terms of sustainability and functionality.
I think there is a valid role for GMOs, and we have certainly gotten comfortable with that in the US in terms of the industrial environment for producing drugs and other types of commodity and higher value chemicals, and even in the production of some crops. But again we have to find ways to derisk the technology and to express the risks carefully to the public and to regulators. In one of my roles at Oak Ridge, I chair our Institutional Biosafety Committee, and I get to see and talk about a lot of the issues related to what we are doing and whether we are doing it properly and safely.
An important aspect of championing industrial biotechnology is being able to communicate life at the interfaces. I am a good example; I was trained as a chemical engineer, I have essentially been working in microbiology, and now I work with biologists doing various kinds of research and with a large number of other kinds of scientists in this area. Part of this experience is being able to translate and move between these different disciplines.
Another big challenge for industrial biotechnology is in the interfaces of the different scales at which our biology functions: the subcellular, the membrane level, the organization of cells, films and biofilms, how they attach to form substrates and ecosystems, the reactors, and mass transfer between solid, liquid, and gas phases. All of those factors come into these interfaces as well, and you have to be able to move between them and not assume that everything is the same within them.
