Abstract
Traumatic brain injury (TBI) is a major public health issue exacting a substantial personal and economic burden globally. With the advent of “big data” approaches to understanding complex systems, there is the potential to greatly accelerate knowledge about mechanisms of injury and how to detect and modify them to improve patient outcomes. High quality, well-defined data are critical to the success of bioinformatics platforms, and a data dictionary of “common data elements” (CDEs), as well as “unique data elements” has been created for clinical TBI research. There is no data dictionary, however, for preclinical TBI research despite similar opportunities to accelerate knowledge. To address this gap, a committee of experts was tasked with creating a defined set of data elements to further collaboration across laboratories and enable the merging of data for meta-analysis. The CDEs were subdivided into a Core module for data elements relevant to most, if not all, studies, and Injury-Model-Specific modules for non-generalizable data elements. The purpose of this article is to provide both an overview of TBI models and the CDEs pertinent to these models to facilitate a common language for preclinical TBI research.
Introduction
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Cautionary tales regarding terminology and interpretation of experimental models include the designation of “severe TBI” for injured animals that are able to ambulate, eat, and groom within hours of TBI, unlike severe TBI in humans. Another major limitation of animal models of TBI is the apparent inability to compare data between laboratories, in part because of overt and subtle differences in injury parameters and outcome measures. Indeed, it is well known that small modifications to an injury device can have dramatic effects on outcome, yet there has not been a means to calibrate interpretation of different data sets between laboratories.
Nonetheless, the ability to compare data is of obvious importance in developing treatment strategies for TBI using preclinical models. Given that there are hundreds of drugs and biologics that demonstrate efficacy in animal models of TBI, an effective way to compare their effect sizes on a global outcome measure is critical for selecting the most promising therapeutics to use in clinical trials.
The National Institute of Neurological Disorders and Stroke (NINDS) has spearheaded the development of standardized definitions for basic units of data, or “common data elements (CDEs),” 19 for clinical research in several neurological disorders, including TBI. 20 Following on the success of the clinical CDEs, a committee of experts was tasked with developing a matrix of CDEs for preclinical TBI models.
Methods
Development and structure of pre-clinical CDEs for TBI
To address the widely heterogeneous aspects of human TBI, numerous animal TBI models have been developed over several decades. In particular, diverse variations in the species, sex, genetic backgrounds, injury biomechanics, neurobehavioral and neuropathological outcomes of models have emerged. Moreover, an array of iterative modifications of established models by individual laboratories adds further complexity.
To reasonably permit data comparison with respect to outcome, CDEs will need to address both “Core” data elements relevant to all studies, such as species, age and sex, as well as those specific to established individual models and their modifications and outcomes. To achieve this goal, a working group was established that comprised 11 experts with experience across a range of preclinical TBI models. Multiple iterative working group meetings and teleconferences were held to draft an overall structure of the CDEs. In addition, individual experts were tasked with identifying CDEs specific to each model.
The proposed CDEs were sent out for review to the larger TBI research community using the NINDS TBI Research listserv (
Results
Thus far, 167 data elements have been defined for preclinical TBI research. The data elements are organized around 10 modules, including a module of Core CDEs (Table 1) and 9 other modules relevant to specific injury models (outlined below) (Tables 2
–6). Note that the full definitions, permissible values, and references are available on the NINDS TBI research website (
WD, weight drop; PCI, projectile concussive impact.
BIN, blast-induced neurotrauma.
PBBI, penetrating ballistic-like brain injury.
ICH, intracranial hemorrhage; ICP, intracranial pressure.
Within structured forms, adapted from the Federal Interagency TBI Research (FITBIR) Informatics System data dictionary (
The level of detail to be captured using the CDEs was determined through an iterative process by working group members, under the dictum that data elements sufficient to influence the results of the study should be incorporated while minimizing the data entry burden to investigators where possible.
Core CDEs (Module 1)
The first module is composed of Core CDEs because of their broad applicability to many preclinical studies. There are 57 Core CDEs, which are divided into four domains including (1) the animal characteristics, (2) injury model characteristics, (3) the animal history, and (4) assessments and outcome measures (Table 1, Figure 1). While some Core CDEs provide essential information that should be included in all preclinical research studies (e.g., age and species), others should be used as needed (e.g., brain imaging and acute physiological assessments). When a study is collecting these types of data, use of the Core CDEs is highly recommended to ensure that data will be collected in a standardized manner and will enable meta-analysis in the future.

The preclinical common data elements (CDEs) are organized around four domains: Animal Characteristics; Animal History (including treatments); Injury Model Characteristics; and Assessments and Outcomes. These domains describe factors and outcomes relevant to preclinical therapy development for traumatic brain injury. Color image is available online at
Modules of specific TBI animal models
Historically, experimental TBI models were categorized broadly as “focal,” or “diffuse.” Focal models included those that induce cerebral contusions, edema, and hematomas. In contrast, diffuse models displayed pathological features comprising more widespread vascular injury, ischemia, general brain swelling, and diffuse axonal injury (DAI). This stark distinction, however, is falling out of use because it is now recognized that few focal models actually induce exclusively localized pathology. In addition, the variation in the character and extent of pathologies between models of diffuse TBI models are too great to be captured under one heading. Instead, more recent descriptions of TBI models address key pathological features and/or injury severity, with the caveat that many other changes may also be present.
The goal for the development of preclinical TBI CDEs is to start with the most widely used models established in the literature (Tables 2 –6). These models and some of the common variations in their execution are discussed below.
Head/brain impact models (Modules 2-5)
In the clinical setting, “focal TBI” is used to describe a spectrum of pathologies regardless of the biomechanical nature of injury. This includes intracerebral and intracranial hemorrhage, as well as one of the most common pathologies across the injury severity spectrum, cortical contusion. In contrast, the vast majority of laboratory models of focal TBI represent pathologies resulting from a blow to the head. Indeed, virtually all focal TBI models are more specifically cortical contusion models with or without more widespread neuropathology. Numerous species have been used to model cerebral contusion including cats, 21 sheep, 22 ferrets, 23 non-human primates, 24 pigs, 25 –30 and rodents. 31 –40 Mice and rats, however, have been, by far, the most widely used species primarily for reasons of convenience and economic viability. 31 –40
Currently, four general techniques are used to apply impact forces directly to the brain or skull of the animal and induce focal brain injury in rodents: weight drop, 31 –34 fluid percussion, 37 –39 controlled cortical impact, 35,36 and projectile impact. 40 The parameters of these models are designed to produce dynamic deformation of brain tissue over a target duration of approximately 10–50 msec, but it can be longer in some cases. 41
As the name implies, weight drop models use weights that are dropped freely or through a guiding apparatus to generate an impact either on the closed cranium, a metal plate fixed to the cranium, or through a craniectomy directly on the dura. The widely recognized Marmarou model of impact acceleration in rats has been described as resulting in diffuse brain injury. 42 In this model, a weight is dropped onto a plate fixed to the rat's cranium. While previous weight-drop models described the head as being fixed or positioned on a hard surface, 34,43 in this adaptation, however, the head was not fixed and allowed to rotate downward. It has been suggested that this motion, in combination with the impact, results in overt widespread damage to axons. 42 Nevertheless, there has been debate as to whether the axonal injury occurs as a result of the acceleration or of skull deformation. In addition to the issue of head stabilization, the surface material on which the animal is positioned can influence outcome (e.g., foam vs. rigid surface), as well as the impounder shape, material, and height from which it is dropped (Table 2).
Fluid percussion (FP) models of brain injury use rapid injection of fluid through a sealed hollow post into the closed or open cranial cavity (Fig. 2c). The diameter and length of the fluid-filled tube are known variables with regard to injury level, in addition to the craniectomy size and shape through which the fluid pulse is injected. Moreover, simply the manufacturer of the fluid percussion device may result in high variation in the nature and extent of injury (Table 2).

Examples of common devices used to induce experimental traumatic brain injury that are modified in various ways that influence outcome. (
Controlled cortical impact (CCI) is a rigid indentation method that typically uses a pneumatic, electronic, or spring-driven impactor to deform the brain through a craniectomy, at a pre-specified velocity and depth, with the dura open or intact (Fig. 2 a,b). More recently, various groups have used CCI directly onto the closed skull in attempts to model more mild and diffuse forms of TBI, often using repetitive injury paradigms. 44 –49 In addition to modifiable aspects of the model such as impact velocity and geometry, the size, shape, and material of the impounder can result in significant changes to the injury (Table 2).
Similar to FP, the size and location of the craniectomy alone can dramatically change injury severity, even when the same impounder is used. Moreover, for various impact models, the bone flap that is removed for injury is often not replaced. In contrast, other groups have opted for a craniotomy, where the original bone flap is affixed back in place or cranioplasty performed using synthetic material to reseal the skull. It is important to note that unless sealed, creating an opening in the skull may influence intracranial pressure (ICP) by acting as a decompressive craniectomy post-trauma, which can potentially affect outcome. 50,51
A more recently published model, referred to as projectile concussive impact (PCI), relies on closed head impact via a projectile launched via the rapid sublimation of dry ice 40 or compressed nitrogen. 52 While the nature of the projectile is critical to the injury, other important variables include the location of impact, surface pressure at contact, the projectile's trajectory, velocity, and the presence or absence of a helmet (Table 2).
Animal models of blast-induced TBI (Module 6)
The incidence of blast-induced TBI has risen markedly in recent military engagements. 53 –56 Blast exposures are often complex events and may induce multiple types of TBI by direct impact, including penetrating injuries and rapid acceleration-deceleration injuries from being thrown or struck by objects, or from exposure to the primary blast wave itself. Thermal or chemical insults can also play a role. 57,58
The role of “pure” or primary blast injury caused by the propagation of rapid pressure waves remains unclear, however. Specifically, the relative contribution of primary blast versus inertial forces in closed-head TBI is currently debated both clinically and experimentally. 59 –61 This lack of clinical information is a major limitation when attempting to generate appropriate models and underscores the need for the use of CDEs in an immature research area where causal mechanisms of injury are uncertain. Nonetheless, in attempts to simulate field conditions, animal models of blast TBI have directly used explosive material or experimental shock tubes to approximate blast conditions.
Direct explosive models have used a range of high explosives, with exposure being “open-field” absent walls/obstructions (e.g., 360-degree radius), “closed-field” within a defined space, and/or within “complex environments” consisting of partial walls/obstructions and vehicle surrogates. Various species have been examined including rodents, 62,63 non-human primates, 64 and pigs. 65,66 To complement these efforts, in-laboratory blast testing has been performed using shock tubes, which are typically cylindrical tubes where rats, 60,67 –76 mice, 77,78 and ferrets 79 have been exposed to blast-like pressure wave propagation driven by compressed gas (e.g., air, nitrogen, helium) (Fig. 2d). Other studies have used explosive charge-driven shock tubes. 80,81
To date, there are not standardized shock tube paradigms (e.g., gas vs. chemical explosives, tube design), species, location of the specimen, or use of body shielding and head mobility, maximum (peak) overpressure peak or overpressure duration; and all of these factors may greatly alter the nature of the injury, which again speak to the critical need for the use of CDEs in an emerging area of research.
Differences in the implementation of blast paradigms may, in part, explain the variations in reporting of thresholds and pathologies between laboratories. Indeed, perhaps because of the recent development of various models and the lack of clinical and neuropathological descriptions of blast-TBI, these models are conceivably the most varied in experimental TBI, and therefore also have the largest number of model-specific CDEs (Table 3).
Penetrating ballistic-like brain injury (PBBI) model (Module 7)
While closed head injuries are the most common type of injury in the civilian population, penetrating injuries from firearms remain a substantial cause of morbidity and mortality, particularly in young adults in the United States. 82,83 In addition, penetrating injuries are significantly more prevalent in the military versus civilian population. 84
Experimental models of penetrating brain injury are not widely studied, however. While several stab injury models have been reported, 85 –88 these fail to recapitulate the biomechanics of common penetrating injuries clinically, such as those associated with firearms. In contrast, PBBI 89 –91 was designed to simulate both bullet trajectory and the resultant cavitation from energy dissipation from a bullet round in the brain parenchyma. This model uses a probe with a rapidly inflatable tip. The size of the probe, magnitude and rate of inflation, as well as location can all influence the pathological nature of the injury (Table 4).
Intracranial hemorrhage (ICH) and subdural/subarachnoid hemorrhage (SDH/SAH) relevant data elements (Module 8) and ICP models (Module 9)
Acute intracranial hematoma is an extremely common consequence of TBI. In particular, acute subdural hematoma frequently results from tearing of the bridging or cortical veins, while acute epidural hematomas most commonly occur secondary to rupture of the middle meningeal artery or from bone bleeding. Despite the relative frequency of these pathologies, acute intracerebral hemorrhage is poorly studied when compared with other trauma-induced brain pathologies, perhaps as a result of their primary management being neurosurgical evacuation. Nonetheless, several models have been reported that largely depend on the introduction of autologous blood to the subdural or epidural space in rodents or larger animals. 92 –97 One group simulated the compressive effects of epidural hematoma in dogs using an inflatable balloon within the epidural space. 98
Models of raised ICP have also been developed by balloon inflation within the subdural, epidural space or the lateral ventricle 99 –105 or via infusion of artificial cerebrospinal fluid or other fluid in to the cerebral ventricles or cisterna magna. 106 –110 Various aspects such as the location, nature, volume, and rate of the fluid injection or balloon inflation are important with regard to interpretation and comparability. Similarly, the magnitude of ICP attained as well as how and where it is measured is critical (Table 5).
Head rotational acceleration models (Module 10)
Rotational acceleration of the brain can be triggered by translational forces impacting the head inducing rotation, in the absence of head impact when the head is allowed to move freely during a sudden deceleration during which the body is restrained, or by pure rotation via head coupling to a rotational acceleration device. Head rotational acceleration causes various brain regions to undergo differential shear, tensile, and compressive forces that cause tissue deformation at high strain rates. 111 The amount of shear strain is related not only to the amount of rotational acceleration, but also to the presence of intracranial dural compartments (e.g., falx, tentorium cerebri) and direction of motion. These inertial forces are responsible for DAI, 112 one of the most common and important pathological features of TBI. 113 –116 Notably, while referred to as “diffuse” clinically, traumatic injury to axons is perhaps more accurately described as multifocal, preferentially involving midline white matter tracts such as the corpus callosum, internal capsules, brainstem, and cerebellar peduncles. 113,115,117
Few models of DAI in gyrencephalic animals have been characterized, although these models are considered increasingly valuable because of their high clinical relevance to mild TBI or concussion. Their lack of widespread use in part reflects the difficulty of developing a model system that replicates the dynamics of diffuse injury, such as the inertial loading conditions produced in automotive crashes or at the moment of head impact. 118
Because of the large effect of brain mass on angular acceleration, acceleration force magnitudes must be very large to compensate for the small brain volumes of most experimental animals and create the same mechanical loading of brain tissue that occurs in human TBI. 111, 119 –122 Indeed, only two animal models have been shown to replicate the key clinical features of DAI. These “inertial” injury models were initially characterized in non-human primates, using non-impact head rotational acceleration to produce coma in association with diffuse axonal damage. 123 Non-human primates were originally chosen for this experimental model because of their large brain mass, which allows for mechanical devices to produce the magnitude of deceleration needed to create the development of high strain between regions of tissue.
More recently, a porcine model of rotational acceleration brain injury has been developed, using young adult miniature swine, 111,124 which have a brain mass of approximately 70–100 g, comparable to that of the non-human primates. In addition, neonatal and pediatric domestic swine models have been developed. 125,126 Peak coronal plane rotational accelerations were found to range from 0.6–1.7×105 rad/sec2. Rotational acceleration at these parameters was sufficient to consistently produce axonal injury throughout the white matter, particularly subcortically.
The complex biomechanics involved in this model are vital to clinical and neuropathological outcomes. Specifically, attaining the relevant peak rotational accelerations and velocities, as well as the maximal duration of rotation are critical in replicating human pathology (Table 6). Moreover, studies using this model demonstrated that the plane of head rotational acceleration in reference to the brainstem is important in determining the induction and duration of loss of consciousness after injury. 127.128
Implementation
The preclinical CDEs are currently accessible via the NINDS TBI Research website (
Another major advantage of the system is that once specific forms are published, standardized and vetted sets of data elements, e.g., for a specific experimental model, will be available to the wider research community to use. To ensure high quality data, FITBIR has quality control measures that reject data that are outside of permissible values. In the future, it is anticipated that FITBIR will also have links to analytical tools to facilitate data analysis.
Discussion
Goals and utility of pre-clinical CDEs for TBI
The preclinical CDEs aim to capture sufficient detail to identify likely sources of variability that in the past have confounded cross-comparison between studies. Notably, as described above, many of these variables are often subtle and inadequately described in published articles. Incorporating this detail into a readily accessible and searchable database will open avenues of cross-comparison between data sets not previously possible and will potentially accelerate the advancement of preclinical TBI research. Such widespread data sharing will not only foster collaboration but will also provide an important platform to address specific scientific questions using existing data sets and meta-analyses. Mapping of preclinical CDEs to existing clinical CDEs may have important utility for translation.
Notably, to permit standardization, established CDEs require stability. As new models are generated and existing models modified, however, the addition of new CDEs (in the form of new modules, as well additional unique data elements) will be incorporated. As such, it is envisioned that the CDEs will be a “living document” with flexibility to update in a dynamic fashion.
Having a centralized and accessible database, such as FITBIR, would also be advantageous not only with regard to study comparison, but also may serve to standardize and increase the rigor of future data collection. Specifically, FITBIR has a tool (ProFORMS) that makes it possible for investigators to create electronic forms that automatically load the data into the database. The creation of ProFoRMS for preclinical research will provide a useful resource that promotes standardized data collection across groups and may be particularly helpful to new investigators. Reference values and existing data sets will also serve as a resource for validation of models in new laboratories. Study design can be aided by searching data for appropriate outcome measures, e.g., behavioral testing at specific time points post-injury. Finally, a potentially important outcome of data submission in the context of CDEs will be the inclusion of studies with negative findings, which are often not submitted or accepted for publication. 129,130 This reporting is a much-needed resource that will allow investigators to avoid unnecessary duplication of studies and the associated waste of resources.
Lastly, while there are few established preclinical CDEs for any disorder, the spinal cord injury (SCI) research community has also undertaken steps toward the identification of key information needed for preclinical research studies and standardization of data elements. 131 Although TBI and SCI produce uniquely different types of neurotrauma, there are many common mechanisms of injury, and ways to integrate the TBI and SCI preclinical CDEs should be explored in the future. There is much to learn about the feasibility and utility of preclinical CDEs, but it is hoped that they will facilitate data sharing and collaboration within and across preclinical and clinical research fields and ultimately lead to biomarker discovery and effective therapies for TBI.
Footnotes
Acknowledgments
We would like to acknowledge the U.S. Department of Defense and the National Institutes of Health who contributed funding for The Federal Interagency Traumatic Brain Injury Research (FITBIR) Informatics System.
Author Disclosure Statement
The views expressed are those of the authors and do not necessarily reflect those of the agencies or institutions with which they are affiliated, including the United States Department of Health and Human Services. This work is not an official document, guidance, or policy of the United States government, nor should any official endorsement be inferred. No competing or conflicting financial interests exist.
S.T. Ahlers: The views expressed in this article are those of the authors and do not necessarily reflect the official policy or position of the Department of the Navy, Department of Defense, nor the U.S. Government. I am a military service member (or employee of the U.S. Government). This work was prepared as part of my official duties. Title 17 U.S.C. § 105 provides that copyright protection under this title is not available for any work of the U.S. Government. Title 17 U.S.C. § 101 defines a U.S. Government work as a work prepared by a military service member or employee of the U.S. Government as part of that person's official duties.
F.C. Tortella: Material has been reviewed by the Walter Reed Army Institute of Research. There is no objection to its presentation and/or publication. The opinions or assertions contained herein are the private views of the authors and are not to be construed as official, or as reflecting true views of Department of the Army or Department of Defense.
