Abstract
Between March and August 2009, there was an outbreak of rabies in both humans and dogs in Hanzhong District, Shaanxi province, China. About 7300 humans were bitten by dogs and 20 died of rabies due to failure to perform postexposure prophylaxis. The local authorities therefore conducted a dog slaughter campaign. From a random selection of brains of dogs culled in the campaign, 0/27 tested positive for rabies virus by immunofluorescence. Of two dogs known to have bitten humans, one was shown to contain live rabies virus by immunofluorescence and mouse intracerebral inoculation. Serological studies during the outbreak revealed that only 1/27 dog was antibody positive: after a mass vaccination campaign, 20.8% seroconverted. Lack of canine vaccination was clearly the main reason for dog rabies spread and human infection. Phylogenetic analysis of a virus isolate showed that its genomic sequence was closely related to the clade 1 rabies strains widely circulating in China. The highest homology was found with the isolate circulating in Sichuan province, a neighboring province south of Shaanxi, indicating the spread of rabies from the south to the north.
Introduction
From March to August 2009, there was an outbreak of rabies in the human population of Hanzhong District, Shaanxi province, China. Hanzhong district (HZ) (Fig. 1) has a human population of 3.78 millions, with 0.30 millions living in urban area and 3.48 millions in rural areas. From February to the end of August 2009, about 7300 people were bitten by dogs, which was two to three times higher than the normal, and 20 died of rabies. These were distributed as follows: two in Hantai (Hanzhong city); two in Nanzheng county, close to Hantai; five in Chenggu county; six in Yangxian county; and five in Xixiang county, the last three counties being further from Hantai and all in rural areas. The exposure rate and the incidence among the exposurers over these 5 months were on average 193/100,000 and 0.26%, respectively. This outbreak triggered slaughter of dogs in a city-run campaign, conducted by dog-beating squads killing any dog spotted on the street, whether owned or stray. The number of dogs in Hanzhong District, Shaanxi province, was estimated to be 408,000, according to the official statistics and on-spot investigation, with a dog:human ratio of 1.079:10. Stray dogs accounted for about 10%, and up to 90% of the owned dogs were not leashed. To the end of June 2009, about 41,000 stray dogs, including some unleashed and roaming dogs, were culled due to the epizootic of rabies, which led to an outcry from animal welfare groups and the local public (

Hanzhong rabies outbreak against the background of rabies epidemic status in different provinces or areas in mainland China in 2008. The black shade indicates the most recent outbreak of human and animal rabies in Hanzhong district, Shaanxi province. The shades from pink to red indicate the epidemic extent of rabies in different provinces. HZ, Hangzhong district; GY, Guangyuan district in Sichuan province; BZ, Bazhong district in Sichuan province.
Hanzhong district is situated in a basin surrounded by mountains and hills. Its south borders Sichuan province, the only province neighboring Hanzhong with enzootic rabies. In 2008, 12 human rabies cases in Bazhong district (BZ, Fig. 1), Sichuan province, were reported to Centers for Disease Control (CDCs), among which 7 occurred in Tongjiang county, the closest to Xixiang county, Hanzhong, Shaanxi province.
Here, to further understand this outbreak of rabies, we collected and assayed the dog samples, and analyzed the causes of this outbreak of human rabies as well as the origin of the virus.
Materials and Methods
Sample collection
Dog brain specimens, including the medulla oblongata, the base of the cerebellum, the hippocampus, and the cerebral cortex, were taken, according to the standard techniques (Dean et al. 1996), from 27 stray animals (randomly captured on street and fields) toward the end of the cull period. Brains of two other dogs that had bitten humans, according to reports to the local Centers for Animal Disease Control and Prevention (Animal CDC), were also collected. All dogs were unowned and from rural areas where mass vaccination concerned only owned. Serum samples were also collected from these stray dogs before they were euthanized. After mass vaccination campaign, serum samples of dogs in a randomly selected community were collected.
Direct fluorescence assay and virus isolation by mouse intracerebral test
Brain specimens were smeared onto glass slides and tested by direct fluorescence assay (DFA), as described elsewhere (Barrat 1996). The fluorescein isothiocyanate (FITC) conjugate was made in our laboratory by labeling antinucleoprotein monoclonal antibodies (produced in our laboratory) with FITC.
Positive brain specimens were homogenized in 10 volumes of phosphate-buffered saline, and 30 μL aliquots were injected intracerebrally into each of ten 1-day-old suckling mice, that is, the mouse intracerebral test. The mice were observed between days 5 and 28 for symptoms indicative of rabies infection. After death, the brains were examined by DFA as above.
Measurement of neutralizing antibody
Dog serum samples were assayed for rabies virus-neutralizing antibody by the fluorescent antibody virus neutralization test as described by Cliquet et al. (1998). Briefly, three-fold serial dilutions of both the serum samples and the controls were prepared in microplates. Each serum dilution was tested in quadruplicate. Fifty microliters (100 TCID50) of challenge rabies virus CVS-11 was also added to each well. After 1 h of incubation at 37°C in a 5% CO2 humidified incubator, 50 μL of BHK-21 cell suspension, containing 4 × 105 cells/mL (routinely maintained in our laboratory) in Dulbecco's minimum essential medium supplemented with 2% newborn calf serum and 100 IU/mL biantibiotics, was added to each well and the plates were incubated for 48 h at 37°C. After fixing the cells in 80% cold acetone for 30 min at room temperature, the plates were stained by adding FITC-conjugated anti-rabies monoclonal antibody to each well, incubating at 37°C for 30 min and then washing with phosphate-buffered saline–Tween 20. The plates were examined by fluorescence microscope (Olympus). Presence or absence of fluorescent foci in the cells was recorded. Endpoints were calculated as the inverse of the highest dilution showing no fluorescence, using the Spearman–Kärber formula (World Health Organization, 1996). A standard anti-rabies serum (AFSSA, France) was included as a positive control in all assays, and data were calculated as IU/mL of rabies virus-neutralizing antibodies.
Phylogenetic analysis
The nucleoprotein (N) or glycoprotein (G) gene was amplified from brain specimens by RT-PCR according to standard techniques (Heaton et al. 1999) with the following primers: RV-N-F: 5′ ACGCTTAACAACAAAACCATAGAAG 3′ RV-N-R: 5′ CGGATTGACGAAGATCTTGCTCAT 3′ RV-G-F: 5′ CATCCCTCAAAAGACTTAAGGAAAG 3′ RV-G-R: 5′ CCGAGGAGATGAGGTCTTCGGGAC 3′
Amplicons were sequenced by the TaKaRa. The Maximum Composite Likelihood model of MEGA 4 (MegAlign, DNASTAR Software Suite, Version 7.1.0 (44); Dnastar, Inc.) was used for phylogenetic analysis. This method is a character-based method that analyzes individual substitutions to determine the tree construction possible for the data and then compare the trees for optimality. Bootstrap values were calculated from 1000 repeats.
Results
Assay of dog brain specimens and isolation of rabies virus by mouse intracerebral test
By DFA, none of the 27 brain samples from the culled dogs was positive for rabies virus infection, but the brain of 1 of the 2 dogs that had bitten humans was found to be infected. After intracerebral inoculation of 30 μL aliquots of the DFA-positive brain specimen, all suckling mice showed initial symptoms of rabies on day 11 postinoculation and all died within 8 days. The dead mice were further shown to be rabies positive by DFA. This isolate was designated Shaanxi-HZ-6.
Antibody assay of dog serum samples
Serum samples taken before the outbreak were unavailable. Twenty-seven serum samples were collected from stray dogs during the outbreak. Only 1 of the 27 serum samples had a positive neutralizing antibody titer (0.38 IU/mL). To the end of June, about 33,6000 dogs were vaccinated using a live vaccine domestically produced from the Flury-LEP strain. The vaccination coverage in dog populations reached to 91.5%. Fifty-three serum samples were randomly collected in a community 3 weeks after the mass vaccination. Eleven of the 53 serum samples tested positive, with titers ranging from 0.11 to 2.97 IU/mL; that is, 20.8% of dogs had seroconverted.
Molecular epidemiology of rabies virus isolate
The virus from the infected dog (Shaanxi-HZ-6) was subjected to molecular epidemiological analysis. Results are shown in Figures 2 and 3 and in Table 1. The virus showed 99.68% homology in its glycoprotein gene (GenBank accession no. GU591789) and 99.7% homology in its nucleoprotein gene (GenBank accession no. GU591790) with an isolate (GenBank accession nos. GU591791 and GU591792) from Sichuan province obtained in early 2009 (designated SC-GY). Glycoprotein and nucleoprotein amino acid sequences of Shaanxi-HZ-6 and SC-GY were identical. This indicated that the epizootic in Hanzhong district is closely related to the rabies epizootic in Sichuan province, with a spread from south to north. The isolated virus also shared high homology with distant isolates such as from Baoding, Hebei province, Guangning, Guangdong province, and Muding, Yunnan province, indicating that it is a highly prevalent and wide-spread strain in China.

The nucleoprotein gene phylogenetic tree of the rabies virus isolate from Hanzhong, Shaanxi province, and other isolates. The black branches stand for dog isolates or vaccine strains outside our laboratory. The blue branches stand for dog isolates kept in our laboratory. The pink branches represent ferret badger isolates kept in our laboratory. The red indicates the isolate of this study, that is, the dog isolate from Hanzhong.

The glycoprotein gene phylogenetic tree of the rabies virus isolate from Hanzhong, Shaanxi province, and other isolates. The black branches stand for dog isolates or vaccine strains outside our laboratory. The blue branches stand for dog isolates kept in our laboratory. The pink branches represent ferret badger isolates kept in our laboratory. The red indicates the isolate of this study, that is, the dog isolate from Hanzhong.
G, glycoprotein; N, nucleoprotein; NA, not available.
Discussion
Until the recent outbreak there had been no human rabies in Shaanxi province since 1992. Mandatory vaccination of dogs had not been implemented, and inadequate consideration was given to the possible consequences. Lack of rabies prevention education resulted in a low voluntary vaccination coverage in the dog population. Our tests showed that only 1/27 dogs before the vaccination campaign during outbreak contained rabies virus-neutralizing antibody. This inadequate figure is probably the reason that rabies virus was allowed to enter the local dog population and to spread rapidly. After the mass vaccination, only 20.8% (11/53) seroconverted, which is still low compared with the requirements of 70% immunization coverage to stop the spread of rabies (
Rabies is widely known as a disease of the poor (Sudarshan et al. 2006). This can be further understood by the high number of human deaths who all lived in rural areas except two, and by the canine vaccination campaign after the outbreak. For example, a live rabies vaccination costs 30 Ren Min Bi (RMB), equivalent to about 4.3 U.S. dollars, of which the government undertook to pay half. Even so, some dog owners were unwilling to pay the remainder, preferring to abandon their dogs. Since the local peasants live only by planting crops and have no extra income from sources such as industry or tourism, 15 RMB was too large a sum to pay for their animals.
Compared with the occurrence of rabies in some districts in south China, the number of human rabies cases in this region is not particularly high. However, the outbreak drew public attention due to the large-scale dog slaughter. That this was probably unnecessary is seen by the results on the 27 brain samples of the stray dogs, all being rabies negative. However, dogs that bite people do have the potential of being infected with rabies: consequently, their elimination and testing for rabies was appropriate. The slaughter action was undertaken in response to the rapid outbreak of human deaths since a survey had found that on average 18.3% (13/71) of dogs from all eleven counties of Hanzhong district contained rabies virus in their saliva, as demonstrated by ELISA. It was even shown that saliva samples of 40%, 30%, and 36.4% of dogs from Chenggu, Yangxian, and Mianxian counties of Hanzhong district, respectively, were rabies virus positive, according to government-run tests (
The number of dogs in Hanzhong district was 408,000, with a dog:human ration of 1.079:10, which is at a middle level, compared with the figure of 0.6–1.5:10 reported previously (Tang et al. 2005). However, all the 10% stray dogs and the 90% of the owned but unleashed dogs had not been vaccinated, and this made the dogs at risk of exposing rabies before this time of vaccination campaign. According to the official data, 367,000 dogs (accounting for 74.1% of the total owned dogs) had been vaccinated in this district from the beginning of the human rabies outbreak to the end of June 2009 (
The isolated viral strain is highly homologous with the isolate from Sichuan province in both the nucleoprotein and the glycoprotein genes, and belongs to clade 1 (Zhang et al. 2009). Sichuan is a province where rabies has been historically moderately enzootic, with the situation only becoming serious in recent years. For example, human rabies cases in Sichuan have increased from 16 in 2004 to 49 in 2005, 190 in 2006, and 372 in 2007. As the local government has taken measures to vaccinate dogs and to provide more extensive postexposure prophylaxis in humans, the numbers are starting to decrease, with 172 human cases in 2008, and 47 cases in the first half of 2009, according to the information provided by China CDCs. As Gansu and Sichuan provinces are neighboring on Hanzhong district, and since Sichuan is the only neighbor province on Hanzhong in which rabies is enzootic, this virus strain appears to have originated in Sichuan before being transmitted to Hanzhong. However, the isolate also possesses high homology with other strains from epizootics in China, including those from provinces in the south and north—for example, from Baoding, Hebei province, Guangning, Guangdong province, and Muding, Yunnan province (Figs. 2 and 3)—indicating that this virus strain is prevalent in China and has a high transmissibility in dog populations without sufficient level of neutralizing antibody in their sera. Although nucleotide mutations of the glycoprotein in some sites outside the main antigenic regions (Flamand et al. 1980, Lafon et al. 1984, Dietzschold et al. 1988, Prehaud et al. 1988) occurred in this isolate, the key amino acids among antigenic sites remained stable (Fig. 4). Why the strain in clade 1 maintains its prevalence in dogs in China requires further biological and epidemiological study.

Alignment of glycoprotein amino acids of 11 rabies virus isolates (clade 1) from different provinces of China. Boxes with continuous green lines indicate key antigenic sites: antigenic site II (34–42 and 198–200), antigenic site I (231), VI (264), III (330–338), and “a” (342). All the amino acids of the glycoproteins between #Shanxi-HZ-6-G and #SC-GY-G are completely the same.
Conclusions
The major causes of human rabies outbreak in Hanzhong District, Shaanxi province of China, include the high number of stray dogs and failure to vaccinate the dogs, with resulting low vaccination coverage. The virus isolated in this epizootic is highly homologous to that from a neighboring province, Sichuan, which is one of the most prevalent strains of clade 1 widely distributed in China.
Footnotes
Acknowledgments
This investigation was funded by the Key Project of National Science Foundation of China (30630049) and the China National “973” Program (2005CB52300).
Disclosure Statement
No competing financial interests exist.
