Abstract
Since its introduction as a model organism in the 1980s, the use of zebrafish (Danio rerio) in research has expanded worldwide. Despite its now widespread use in research, guidelines to safeguard the ethical treatment of zebrafish, particularly with regard to euthanasia and humane endpoint practices, remain inadequate. One well-recognized example is the use of excess tricaine methanesulfonate (MS-222) as a means to euthanize zebrafish, regardless of life stage. In this study, through nationwide expert elicitation, we provide a detailed account of zebrafish research practices within the Republic of Korea and the challenges of implementing appropriate methods for euthanasia as a humane endpoint, with many opting for hypothermic shock. We report a local expert consensus for establishing national guidelines to improve zebrafish welfare and good research practice. Suggestions and recommendations for national guidelines were offered. Taken together, our findings raise awareness broadly among zebrafish research practitioners in the field, offer an accurate account of the welfare and treatment of zebrafish in research within the Republic of Korea, and advocate for the development and implementation of national guidelines. As such, our study is useful as a model to adopt the expert elicitation approach to investigate, quantify, and address welfare concerns in zebrafish research, and to establish best practice guidelines.
Introduction
Pain is one of the most important considerations for animal health and welfare. Since Huntingford et al. described the “Five Freedoms” for fish welfare in 2006, specifically, freedom from hunger and thirst, discomfort, pain, injury, disease, fear, and distress, discussions on animal rights for fish have intensified, bringing even more attention to the importance of improving the standards of fish welfare. 1 While our understanding of pain perception in fish remains incomplete, assessments of their welfare should thus be more conservative, rather than less. 2
Examples of such conservative decision making are observed in legislation on cephalopods and decapods in European countries. Notably, the European Union is considering cephalopods as being subject to regulation in scientific procedures based on the Directive 2010/63/EU,3,4 while Switzerland and Norway are including decapods in regulation as well.5,6 Such legislative actions are based on the knowledge of pain response-related neuroanatomical, behavioral, and pharmacological criteria in the animals, 7 which are common to fish in so far that their absence of a neocortex makes direct judgment impossible.
One main use of animals by humans is for scientific research. The use of fish as a laboratory animal for research continues to increase 8 and, at the same time, zebrafish is the most widely used experimental fish species ever since it was first presented as a model organism for genetic analysis in the 1980s. 9 Zebrafish have various advantages as an animal model, including its capacity to produce large litter sizes and its optically transparent embryos that enable high-resolution organism-level imaging, as well as well-established protocols that guide researchers to generate transgenic organisms.
These characteristics and more altogether make zebrafish an excellent experimental animal species for investigating cellular dynamics and to decipher the underlying molecular mechanisms for tissue homeostasis, disease, and aging.10–12 In addition, given the worldwide practice of 3Rs (replacement, reduction, and refinement) in conducting research on animals, the use of zebrafish represents a viable, alternative animal model to reduce and replace the use of mammals. 13 For these reasons and more, the use of zebrafish in research continues to rise. 14
The increase in the usage of zebrafish must be met with improved care and welfare considerations for fish in animal research, particularly in the ethical considerations for pain, pain relief, and euthanasia. Indeed, the ethical and humane practice of euthanasia as an approach to preventing continuous harm to fish, or to prevent unnecessary or excessive pain in experimental situations, or both, is a top consideration in zebrafish research. 15
Particularly, the “how” and “when” to implement euthanasia are important considerations, together with decision making on euthanasia methods and humane endpoint settings. Accordingly, the need for establishing guidelines for zebrafish euthanasia and humane endpoint is growing. Most of the global guidelines existing are from individual institutions and only a few cases are from the national level. In case of the Republic of Korea, which is the country of focus for this study, no national-level guideline exists and, even at the institutional level, there is only one set of guidelines for zebrafish euthanasia.
To establish effective guidelines, it is important to derive implications for the necessity of guidelines for field experts based on the precise objectification of current situations and recent knowledge in the field. When establishing a guideline at a nation-wide level, the methodology of expert elicitation could be an appropriate method to gather critical knowledge beyond what is reported in publications.
In this study, we conducted an extensive literature survey to describe the world-wide status of euthanasia and humane endpoint setting for zebrafish. Also, we carried out expert elicitation to understand current practices in euthanasia and humane endpoint treatment of zebrafish in the Republic of Korea, and to evaluate the necessity and feasibility of establishing guidelines. Through this, we drew attention to the importance of zebrafish welfare and have piqued interest from field experts about zebrafish welfare. Finally, through our expert elicitation and literature search, we have developed a set of national guidelines for the Republic of Korea, for the use of zebrafish in research.
Materials and Methods
Literature survey: Global status of zebrafish studies
Annual numbers of publications from either Google Scholar or Web of Science with the following keywords were counted from 1980 to 2022: “zebrafish”; “zebrafish” and “euthanasia”; “zebrafish” and “humane endpoint”; and “zebrafish” and “IACUC.”
National trend of research animal use in the Republic of Korea
Data on the number of animals used for research purposes in the Republic of Korea from 2016 to 2021 were collected from press releases issued by the Ministry of Agriculture, Food and Rural Affairs. The proportional changes in animal clades used were analyzed.
Literature survey: Global status of euthanasia and humane endpoint application for zebrafish studies
Four hundred sixty-eight articles were selected from PubMed, SCOPUS, and CAB Direct for trend analysis on euthanasia and humane endpoint applications in zebrafish studies, using keywords [“zebrafish[Mesh]” and (“endpoint determination” or “animal use alternatives” or “ending point” or “humane endpoint” or “humane end point” or “humane endpoints” or “pain scale” or “pain level” or “refinement” or “welfare” or “animal welfare” or “euthanasia”)]. Among the 468 articles, 223 full articles with descriptions on the zebrafish life stages and methods of euthanasia were selected for the trend analysis.
Global guidelines for euthanasia and humane endpoint for zebrafish experimental use
Both institutional and national guidelines for zebrafish euthanasia and humane endpoint were collected and summarized.
Nation-wide survey for zebrafish facilities: National status of zebrafish euthanasia in the Republic of Korea
Major zebrafish facilities in the Republic of Korea were subjected to the survey, with personnel at those facilities asked to respond to questions relating to the following topics: Life stages of the zebrafish in the facility; euthanasia methods used; number of cages; and location of the facility.
Nation-wide subject matter expert elicitation: Current knowledge of experts on zebrafish euthanasia and humane endpoint setting
Subject matter experts were selected carefully based on both the depth of their experience in zebrafish research as well as in their understanding of field situations in the Republic of Korea. Selected experts included the following: professors from the Lab of Laboratory Animal Medicine, professors from the Lab of Aquatic Biomedicine, professors well experienced with zebrafish research recommended by the Korea ZebraFish Society (KZFS); and professors with zebrafish research experience of over 20 years. A formal survey was carried out for 2 weeks in which questionnaires of three major categories were provided: (1) “Give us suggestion about zebrafish euthanasia method and explain the reason why”; (2) “Give us suggestions about zebrafish humane endpoint and explain the reason why”; and (3) “Give us additional comments related to nation-wide euthanasia and humane endpoint guideline setting.” Survey questionnaires were sent through email and the results treated as confidential.
Results
The number of research publications featuring zebrafish as an animal model is increasing
We began by analyzing the number of published documents that featured “zebrafish,” with data collected from a search through the internet resources of Google Scholar as well as Web of Science. As shown, from the 1980s when this animal began to gain prominence as a research animal model, research publications that featured zebrafish grew exponentially (Fig. 1).

The number of zebrafish-related publications indexed in Google Scholar and the Web of Science from 1980 to 2022. The number of publications is represented in 4-year periods, and items were retrieved by a search with the keyword “zebrafish” from each search engine.
Next, we focused on research from the Republic of Korea. We investigated datasets on animals used for research purpose in the Republic of Korea to find that, from the period between 2016 and 2022, the use of fish has increased in absolute number (Fig. 2A), consistent with the international trend observed in Figure 1. Next, we compared the proportions of fish used with that of rodents, which are widely used in research. As shown, the proportion of fish used has increased by 14.86% (from 4.07% in 2016 to 18.93% in 2021), while the proportion of rodents used has decreased by 18.97% (from 91.46% in 2016 to 72.49% in 2021; Fig. 2B) among the annually used research animals. In terms of proportional change in particular, the trend is opposite to that of rodents as is increasing, in general, since 2016.

Annual trends of research animal use in the Republic of Korea.
Global status of zebrafish euthanasia and humane endpoint for research
Next, we wanted to study the publication landscape for zebrafish research that described euthanasia as their humane endpoint. For this, we performed a search for articles using dual keywords “zebrafish” and “euthanasia” (Fig. 3A), “zebrafish” and “IACUC” (Fig. 3B), or “zebrafish” and “humane endpoint” (Fig. 3C), and related these to the number of articles retrieved from searches with the keyword “zebrafish” alone. As shown, we found that the proportion of publications with our dual search terms relative to publications with the term “zebrafish” alone was very low, at <0.2%, across the time points examined.

Ratio of euthanasia, humane endpoint, and IACUC-related articles among zebrafish articles from Google Scholar and Web of Science. The proportion of the number of articles found from dual keywords
Among the categories for dual search terms, the proportion of articles retrieved from searching “zebrafish” and “euthanasia” was highest, yet were no more than 0.16% of publications featuring “zebrafish” alone (Fig. 3A). Articles with the dual search terms “zebrafish” and “IACUC” (Fig. 3B), or from searching “zebrafish” and “humane endpoint” (Fig. 3C), were all proportionally lower still. These data suggest that, at least for published research items available online, the terms “euthanasia,” “humane endpoint,” and “IACUC” are not frequently mentioned in studies featuring zebrafish as a search term.
Guided by these results, we next performed a literature search on the online resources of from PubMed, SCOPUS, and CAB Direct to select 468 documents with defined search keywords as described (please see Materials and Methods for details). Of these, we found 223 documents that met our selection criteria to investigate the global status of euthanasia methods used in zebrafish research. Of the methods of euthanasia described in these documents, which were counted, assessed in accordance with procedures relative to the life stages of zebrafish, we found that “tricaine methanesulfonate (MS-222) overdose” was the most frequently used method from all life stages, including embryo, larva, juvenile, and adult (Fig. 4), with the next most frequently mentioned methods being “hypothermic shock” and “other anesthetics overdose” (Fig. 4). Notably, for a significant majority of articles, the method of euthanasia across all life stages was not mentioned.

Proportions of zebrafish euthanasia methods described from published articles. Two hundred twenty-three selected articles were further classified according to the life stages of used zebrafish and the proportion of euthanasia methods used in each life stage group was analyzed. A major portion of articles did not even mention the euthanasia methods used.
Subject matter expert elicitation about the status and practice of euthanasia in zebrafish research in the Republic of Korea
We conducted a broad study across ten major zebrafish facilities in the Republic of Korea to better understand the status and practice of zebrafish euthanasia methods within the Republic of Korea. From this study, we found that the average number of fish tanks from the facilities was 413 and 80% of the facilities were accommodating zebrafish of all life stages from embryo to adult. From our study, we found that “hypothermic shock” represented the most frequently used euthanasia method from across all facilities surveyed (40.0%), followed by “MS-222 overdose and successive hypothermic shock” (33.3%) and “MS-222 overdose” (20.0%; Fig. 5).

Euthanasia methods that are currently being used in the zebrafish facilities of the Republic of Korea. All euthanasia methods being used were based on responses from our study of facilities that permitted single or combined methods of euthanasia of zebrafish. All methods represented in this graph are represented regardless of life stages of zebrafish that were euthanized.
Subject matter expert elicitation for zebrafish euthanasia and recommendations for improvements in humane endpoints for zebrafish research
Eleven experts were carefully selected as the representative subject matter experts in the Republic of Korea. All such experts strictly meet the following conditions to (1) possess significant experience (>20 years' experience) in zebrafish research, (2) have an appreciation of the current status of the field of zebrafish research in Korea, and (3) to continue to be involved in zebrafish research. The response rate of our survey was 100%, and experts were asked to offer suggestions on euthanasia and humane endpoint methods for each life stage for zebrafish based on their expert knowledge, regardless of the currently used methods in practice.
As per our results, we found that “MS-222 overdose” was the most frequently suggested euthanasia method for zebrafish across all life stages, from embryo to adult (Fig. 6A). This was followed by “hypothermic shock” (16 suggestions), then by the combined method of “MS-222 overdose followed by hypothermic shock” (8 suggestions). For embryo and larva stages of zebrafish, suggestions for “hypothermic shock with sodium hypochlorite” (six suggestions) and “MS-222 with sodium hypochlorite” (four suggestions) were suggested for embryo and larva. Sodium hypochlorite usage was suggested specifically for the embryo and larval stages, with emphasis on secondary method choosing different methods according to the life stages. Few suggestions for “anesthesia and decapitation” and “hypothermic shock and decapitation” were offered for adult staged zebrafish.

Data collected from zebrafish research experts in the Republic of Korea on the practice of euthanasia and humane endpoint monitoring for zebrafish.
Further to our investigation of the humane endpoint for zebrafish research animals, suggestions were presented separately from “embryo and larva,” and “juvenile and adult.” At the same time, the experts mentioned the need for monitoring zebrafish to guide decision making on humane endpoints for zebrafish research, depending on the types of experiments undertaken. For example, for embryo and larval zebrafish research, we received recommendations to set a humane endpoint with reference to the toxicological reactions criteria described from OECD, 16 as this can provide guidance for abnormal development of an embryo. For juvenile and adult, “loss of balance,” “deep wound,” “lying down,” “dropsy and ascites,” and “abnormal swimming” were recommended by multiple experts as humane endpoints, followed by “hernia,” “scoliosis,” and other criteria featured in our graph (Fig. 6B).
National and institutional guidelines of euthanasia and humane endpoint for experimental use of zebrafish
National-level guidelines for zebrafish euthanasia have been established in several countries (Table 1). The guidelines are published by government departments of each respective country. Different national guidelines recommend different methods of euthanasia for zebrafish in research, depending on life stage, as shown in the Table 1 with four countries as examples, including United States, Canada, India, and Qatar. In addition, guidelines published by the American Veterinary Medical Association (AVMA; Table 2), recognized as among the most highly cited, also recommended the use of secondary methods for euthanasia of zebrafish to assure the loss of consciousness and death through their recommended procedures. Taken altogether, our results show that, despite the increasing use of zebrafish in research globally and in the Republic of Korea, there is significant need in developing best practice for the implementation of zebrafish euthanasia for researchers in the Republic of Korea and the rest of the world.
Global Guidelines for Zebrafish Euthanasia
dpf, days postfertilization; DW, distilled water; LN, liquid nitrogen.
Fish Euthanasia Method Suggestion from American Veterinary Medical Association Guideline 15
IC, intracardiac; IM, intramuscular; IP, intraperitoneal; IV, intravenous; NPCB, nonpenetrating captive bolt.
Discussion
The number of research studies that employs zebrafish is increasing; however, the issue of euthanasia and the considerations for humane endpoints for zebrafish experiments seem to be reported infrequently. Given the expansion in the number of publications in the field of zebrafish research, suitable guidelines for euthanasia and the considerations for humane endpoints for zebrafish do not appear to follow an upward trend in their description in research publications.
From our findings, we found a few nations worldwide with guidelines for zebrafish euthanasia, with the majority of institutional guidelines sourced from North America. With regard to guidelines for humane endpoint for zebrafish research practices, no national guide was found globally, and such guidelines were identified in only a few institutions. Thus, more can be done to improve the monitoring of zebrafish welfare in research with regard to pain relief, and their appropriate methods for euthanasia when required, as well as the awareness among researchers to carry out good research practice for zebrafish research worldwide.
Currently, euthanasia methods undertaken in academic research for many countries worldwide require established guidelines that do not have such guidelines in place. Data from our literature study showed that the “MS-222 overdose” was the most used euthanasia method, regardless of life stages of the animal, the trend of which is consistent with the previous international survey study by Mocho and Krogh. 17 However, guidelines from different countries recommend using different methods of euthanasia for zebrafish, according to the life stage.
We found that, for countries where guidelines are in place, the use of MS-222 overdose alone for embryo and larval zebrafish was not indicated, likely owing to the different sensitivities and resistance to MS-222. 18 Such discrepancy in the choice of euthanasia between published studies and guidelines is noted as a consideration for the establishment of a future consensus. Nevertheless, such an inconsistency across reported instances of euthanasia in zebrafish publications could be attributable to the lack of guidelines for the location of origin for a study, or possibly the time gap between enactment of guidelines and the increase in the use of zebrafish in academia. Based on our data from researchers in the Republic of Korea, experts agree on the need for animal welfare for lower vertebrates, including fish.
In our study, we find that the practice of using optimal methods for euthanasia and their reporting in academic research publications fall behind global trends and improvements in animal welfare. In the Republic of Korea, our survey data indicate that the most frequently reported method of euthanasia for zebrafish facilities is hypothermic shock, regardless of the fish's life stage.
However, the fact that applying hypothermic shock alone to embryo and larva zebrafish is not effective enough for euthanasia has been known through previous studies.19,20 Not even the world trends and guidelines are consistent with the Korean trend, as the MS-222 overdose was found to be the most widely used method worldwide from both this study and a previous reference. 17 Indeed, the development of national guidelines for the Republic of Korea will bring practice standards closer to that observed in countries with established guidelines, including the recommendations to use specific methods of euthanasia according to the life stage of zebrafish under experimentation. In our survey, respondents cited the lack of regulations or guidelines, as well as the accessibility to the practice of hypothermic shock method as reasons for its widespread application.
We found only one accessible set of euthanasia guidelines in the Republic of Korea, which was established by a private institution. Nevertheless, all 11 respondents in our survey agreed with the need to establish guidelines to formalize the welfare considerations for zebrafish in research. Given the growing awareness that the differences in susceptibility to a certain method of euthanasia are related to the life stages of zebrafish, particularly with regard to the time point for the development of an animal, 18 we conclude from the results of our survey that guidelines will have to be established, which align with the most up-to-date knowledge of existing guidelines, and our understanding of zebrafish pain perception. Also important is the development of training guidelines to ensure that zebrafish researchers are aware of the scientific basis and implications of appropriate versus inappropriate use of specific methods of euthanasia on zebrafish in research.
From our survey, the top-ranked euthanasia method suggested in the Republic of Korea is to expose zebrafish to an overdose of MS-222, regardless of life stage. Given that the sensitivity to MS-222 is different for zebrafish larva and embryo zebrafish, compared to juveniles and adults, 18 our results indicate that even experts require greater awareness regarding their choice of euthanasia. In addition, euthanasia methods of choice were limited mostly to the MS-222 overdose and hypothermic shock, not opening the door for other potential and effective methods, that is, lidocaine hydrochloride or electric stunning.20–22
In the case of humane endpoint, the frequency of descriptions documented in research publications is much less than in descriptions of euthanasia. We found that guidelines for the humane endpoint for zebrafish experiments were scant, both nationally and internationally. Our expert elicitation found repeated mentions of lack of an agreed mechanism for setting humane endpoints for zebrafish with respect to their life stage, for guidelines on the use of specific methods of euthanasia, and the need for establishing guidelines to guide decision making for zebrafish welfare in experiments. As an example, for embryo and larva stage zebrafish, abnormal development can be used as the criterion for determination and thus the use of developmental toxicity reference, as suggested by multiple respondents.
As a result of the intensive literature survey and expert elicitation reflecting current biological knowledge and the trend of world guidelines, we suggest that an agreement could be reached on suggestions for zebrafish euthanasia method and humane endpoint setting. For euthanasia, an agreement was reached on leaving both hypothermic shock and MS-222 overdose as possible choices for juvenile and adult zebrafish. 23
In the case of larvae, even though MS-222 overdose was the most recommended by experts, a practically remarkable point was that the second and third most recommended euthanasia methods were all using dual methods, that is, MS-222 overdose followed by hypothermic shock, MS-222 overdose followed by sodium hypochlorite, and hypothermic shock followed by sodium hypochlorite. The need for dual methods of euthanasia in a single procedure was recommended based on studies of the difference in sensitivities to MS-222 or hypothermic shock between life stages of zebrafish,18,19 a consideration already reflected within guidelines worldwide. Based on such discussions, dual euthanasia methods could be given greater consideration, despite their lower preference as second and the third most recommended choices, as reflected in responses from our survey.
Although MS-222 is currently the most suggested anesthetic method for adult zebrafish in diverse guidelines, it is well known that this chemical could induce aversive reactions from diverse fish species.21,24 Such a fact reflects the need for excavating better option for fish euthanasia based on thoroughly reviewed scientific studies, opening the door for possible and better effective euthanasia methods. Lidocaine hydrochloride and electrical stunning both could be one of the other applicable euthanasia methods for fish based on the previous study.20,25
Lidocaine hydrochloride (1 g/L) mixed with EtOH (50 mL/L) buffered with NaHCO3 (2 g/L) shows least aversive effect compared with MS-222 usage in zebrafish. Although lidocaine is not frequently used for zebrafish in laboratories currently, this could be suggested as successive and even better euthanasia method with an efficient and stress-free manner for zebrafish. Electrical stunning can be another choice of euthanasia, a method that has been mainly applied for farm fish culling for the purpose of food, fish oil, or fertilizer production, as is a nonchemical euthanasia method applicable for massive sacrifice. 22 As such, electrical stunning can also be used for zebrafish according to the experimental needs, including nonchemical euthanasia and/or massive sacrifice when proper equipment is set.
In the case of humane endpoint, diverse criteria, including loss of balance, deep wound, lying down behavior, and ascites, were suggested for adult and juvenile, based on recommendations from many experts, as described by Sabrautzki et al. 26 Such criteria are widely consistent with the previously proposed concept of humane endpoint by Ellis and Katsiadaki, 27 based on moribundity defined with a lack of response to external stimuli, loss of equilibrium (i.e., loss of the righting reflex), and a slow opercular ventilation rate.
For embryo and larva stage zebrafish, embryo coagulation, lack of somite formation, nondetachment of the tail, and lack of heartbeat were suggested as criteria for determining the humane endpoint based on the abnormalities that can be seen through fish development until their maturation. 16 However, since the criteria for the humane endpoint can be set differently depending on the type of experiment, it is important to first evaluate the effectiveness of such physiological traits through an examination of existing reported studies, or to conduct a small-scale pilot study.28 It was also mentioned through the elicitation that accumulating references of the humane endpoint setting in diverse zebrafish experiments is another reason for the needs of such efforts, for later use of extrapolation.
We conclude that expert elicitation can be a methodology to understand and report on the direction of nationwide decision making on this area of zebrafish research. By reflecting the situation in front line, beyond reported research in publications, and by drawing consensus based on the knowledge of field experts, we could evaluate zebrafish welfare in the Republic of Korea alongside world trends based on our field data. Our study was also valuable to reveal that knowledge standards for the use of methods of zebrafish euthanasia and humane endpoint setting could be raised. Also, our expert elicitation makes the call for the establishment of national guidelines and has attracted the attention of field experts. Thus, expert elicitation may be useful to other institutions and governments that may be interested in establishing their guidelines.
Conclusion
This study highlights the growing use of zebrafish in research field and finds that both the reporting of methods of euthanasia and humane endpoint practices, as well as the availability of guidelines for such practices, could altogether be significantly improved. The disparity between the increasing number of zebrafish studies and the limited availability of national and institutional guidelines is observed worldwide.
We conducted expert elicitation in the Republic of Korea to find that guidelines for and the practice of zebrafish research methods for euthanasia and humane endpoint application could be improved. Based on our survey results, we conclude that experts agree to the establishment of national guidelines so as to improve zebrafish welfare and ensure adherence to best practices. We find that expert elicitation was proved effective as an approach to assess the current state of zebrafish welfare and advocate the establishment of national guidelines, and to invite participation from field experts. We offer the recommendation that countries and institutions in need of such guidelines may consider employing expert elicitation as an effective method to address such concerns.
Footnotes
Acknowledgment
Article editors Julian Heng and Xin Du (Remotely Consulting, Australia) provided professional English-language editing of this article (Article Certificate No. 7Gh9Ne4F).
Authors' Contributions
S.W.K.: Methodology, investigation, data curation, and article writing; W.J.J., S.H.H., and S.K.K.: Investigation and data curation; H.R.: Methodology and investigation; H.J.K.: Methodology, investigation, and funding; Y.R.N. and S.H.S.: Conceptualization, methodology, investigation, validation, article review, supervision, and funding.
Disclosure Statement
No competing financial interests exist.
Funding Information
This work was supported by the National Research Foundation of Korea (NRF) grant funded by the Korea government (MSIT; Grant No. 2022R1C1C2010114). This work was also supported by a fund (Grant No. F-1543071-2022-23-01) from Animal and Plant Quarantine Agency, South Korea.
