Abstract
This work presents new data from phytolith and speleothem analyses that cover the middle to late Holocene from northeastern Iraq in the Kurdistan region. Coupling these data with previous work, we demonstrate how the region’s environment and climate developed during a time when agriculture became not only established but settlements started to transform into larger urban areas. Results demonstrate a wetter phase during the middle Holocene relative to the present period; a highly seasonal climate with one rainy season is also suggested between 8025 ± 38 and 6977 ± 219 BP. Phytoliths not only suggest a relatively wet environment but they also indicate a diversity of plants used for settlement activity. Sedimentary results complement the indication of a relatively wetter middle Holocene. Archaeologically, terraced construction found in Gurga Chiya and the presence of drought tolerant crops suggest adaptation to stronger, seasonal rains and seasonal droughts in the middle Holocene. Sedimentary, phytolith, and speleothem results suggest relatively drier late-Holocene conditions, although the region continued to be conducive for rainfed agriculture.
Introduction
Research carried out in Iraqi Kurdistan between 2011 and 2016 has enabled the collection of new paleoenvironmental proxy datasets. These data have the potential to reveal not only new insights on the area’s climate and environmental fluctuations, but the coupling of these data with major archaeological finds, including excavation results, will potentially enable a better understanding of how the onset and expansion of agriculture, establishment of cities, and the emergence of major empires spanning the region relate to changing regional environmental conditions. The region’s long historical data, spanning from the onset of writing, long history of land use, and likely climatic change make it an ideal setting to understanding human–environment interactions in the past.
This recent work in the Shahrizor valley of Iraqi Kurdistan, located in an intermontane valley between the Qaradakh range and the Zagros, has focused on the recovery of sediments, phytoliths, and archaeological data. Our intent is to use a multiproxy approach to understand environmental and climatic development, where preferably multiple points of data are used to support the position of given conclusions. Furthermore, the wider region contains abundant caves that contain speleothems (stalagmites and flowstones), enabling the obtainment of detailed climatic data on the region’s ancient rainfall patterns. Only recently have speleothem data covering the late Holocene been published for this part of the Middle East (e.g. Flohr et al., 2017), revealing the great potential of stalagmites for paleoclimate reconstructions. Relatively limited data are also published on the region’s phytoliths and sedimentary results (e.g. Marsh and Altaweel, in press). Therefore, this work is an opportunity to obtain new paleoenvironmental and paleoclimatic data in a region where such proxies are limited.
This paper focuses on integrating archaeological, geoarchaeological, phytolith, and speleothem data in order to understand the Shahrizor and northeastern Iraqi Kurdistan’s paleoenvironment spanning parts of the mid- to late Holocene. Such a multiproxy approach to paleoenvironmental and paleoclimatic reconstructions have been long advocated because they add more robust and more highly resolved data (O’Brien et al., 2005; Roberts et al., 2001; Rosen, 2007), thus enabling researchers to better understand human–environment interactions. Data incorporated here include dated architectural finds, sediments from the Shahrizor valley, phytolith samples from archaeological and offsite trenches, and speleothem results. The objective of this paper is to, for the first time for this region, demonstrate land use and the climatic events shaping the region as agriculture began to dominate the region’s economy and the rise of permanent and larger settlements commenced.
The paper will begin by providing background information on the region, including its geology and hydrology. Previous and ongoing archaeological and sedimentary work is presented, where it will be utilized with the new results presented. The methods employed here, including phytolith and speleothem analyses, are then discussed. New data from phytoliths and speleothems are presented. A wider discussion on the broader implications of the proxies is then given, where combined results show environmental conditions for northeastern Iraq.
Regional background
The Shahrizor and the surrounding mountains and hills (dakhs) are the result of the Arabian plate subducting under the Iranian plate: as the rock layers were folded and thrust upward from the Tethys Sea, they formed a thrust front (the dakhs), a foreland basin (Shahrizor and related plains), and an orogenic wedge (the Zagros mountains; Karim et al., 2008). The force of this tectonic activity can be seen in the abundant folded strata found all over this area. The geology is characterized mainly by Cretaceous limestones, with some Eocene limestones in the west and Triassic limestones found in the Zagros, along with marls and sandstones (Ali, 2007; Karim et al., 2008). Because of the dominance of carbonate rocks, karstification is an important process, along with related spring formation and cave systems.
Quaternary sediments consist mainly of colluvium at the foot of the hills and mountains and alluvial fill in the plains. There is also a contribution of eolian material, particularly in more recent times with increasing aridity and increase of grazing and arable land (Karim et al., 2008). The Pleistocene terraces, which appear as low-lying hills in the plain are a testament of the old land surface prior to Holocene period river incision. There are few perennial rivers presently, but were likely to have been more prevalent in the past, as evidenced by the many paleochannels in the region. Colluvium, resulting from slumps and landslides, is found along the foot of the hills and mountains, as are alluvial fans (Altaweel et al., 2012). Figure 1a provides an overview of the study region and locations of key areas discussed here. The study area lies in the southern part of Iraqi Kurdistan, close to the city of Halabja. A modern dam lake, Darband-i Khan, marks the old confluence of the Tanjero, Sirwan, and Diyala rivers. The Zagros mountains lie to the east; the dakhs can be seen as linear features running on a NW to SE axis.

(a) The region of study including Shalaii cave and (b) detail of the archaeological area.
The Shahrizor region
Hydrologically, the Shahrizor lies within the Shahrizor-Piramagroon basin (also known as the SE Shahrizor basin; Al-Basrawi and Al-Jiburi, 2014; United Nations Economic and Social Commission for Western Asia (UN-ESCWA) and Bundesanstalt für Geowissenschaften und Rohstoffe (BGR), 2013). Today, the climate is semi-arid Mediterranean (FAO 2008; Omer, 2011), with highly seasonal precipitation patterns: cooler, wet winters; and hot, dry summers. The rainfall patterns vary across the plain, with higher precipitation in the northern part (UN-ESCWA and BGR, 2013). Mean annual precipitation in the area of the Halabja-Khurmal sub-basin is about 698 mm (Halabja rainfall station for the period 2002–2012); however, the area experiences cycles of wet years and drought years. Maximum monthly rainfall occurs in February (~149.7 mm) and the minimum monthly average rainfall occurs in August (~0.07 mm). Average air temperature in the basin ranges from 3°C in January to 32°C in July; the annual average is 17–19°C (UN-ESCWA and BGR, 2013).
The aquifers located in the basin consist of sedimentary rocks of marine (mainly limestone) and continental origin (sandstones and other clastic rocks; Ali, 2007). Ali (2007, p. 303) groups the formations and more recent sediments as (1) karstic for Triassic and Jurassic rocks (TKA and JKA); (2) karstic-fissured aquifers for Cretaceous and Eocene rocks (CKFA and EKFA); (3) fissured aquifers for Cretaceous Qulqula Formation (CFA); (4) intergranular aquifers (AIA) and (EIA) for alluvium and Eocene conglomerates, respectively; (5) aquitard of Tanjero rocks (TAT); and (6) complex aquifers of slide debris (SD). Well-known springs around the SE Shahrizor study area are the Sarchinar, Bestansoor, and Zalm springs.
Shalaii Cave climate and hydrogeology
Shalaii Cave lies due west of the SE Shahrizor study area, in the hilly flanks of the Zagros (35°08′42 N; 45°19′17E) and is at 739 m a.s.l. The landscape surrounding the region is highly fissured and well-karstified, formed along the Ashdagh anticline composed of Oligocene rocks. The area around the cave is locally known as Garmian. The cave itself is approximately 600 m long and is located in the Chamchamal-Sangaw basin, where the hydrogeology places it within the Chamchamal-Qadir Karam-Qara Too sub-basin (Al-Jiburi and Al-Basrawi, 2012). The climate in this region is semi-arid Mediterranean (Al-Jiburi and Al-Basrawi, 2012; Omer, 2011). The winters are cool and short; summers are typically hot; annual rainfall is around 463 mm (Chamchamal station measurements during 2000–2014). Maximum monthly average rainfall occurs in January (105 mm) and the minimum monthly average of rainfall occurs in July (< 1 mm), with snowfall rarely occurring in the area. The average minimum monthly temperature occurs in January (7.1°C) and the average maximum monthly temperature is in August (33.2°C).
Relevant in the formation of Shalaii Cave is the Pila Spi aquifer, where infiltration capacity of the aquifer is high and rainfall is the main contributor to groundwater recharge for the aquifer. The infiltration rates in the region are highly affected by occurrences of highly fractured, cavern depressions, sinkholes, and karstified rocks that are formed. Technical hydrogeological investigations performed in Northern Iraq (Stevanovic and Markovic, 2004) have indicated recharge coefficients amount to 30–50% of the total rainfall values for the Pila Spi aquifer. During the wet season, the reduced evaporation rate, rainfall, and even the layer slope contribute to the above-mentioned rate of the Pila Spi aquifer. Meteoric water infiltrates through the Oligocene rocks, where the water is enriched in sulfate. Surrounding springs are perennial throughout the year, depending on the runoff duration, although they vary with the daily discharge amount as described by Baba Sheikh (2000). Well-known springs around the Chamchamal-Sangaw basin are the Shalaii, Awa Spi, and Hazarkani springs. The area today is largely devoid of major vegetation.
Relevant previous and recent research
Although there has been little published work in the region, archaeological activity has increased since 2011 in Iraqi Kurdistan. The data are still relatively limited, particularly in geoarchaeological and other environmental data, but new work is now enabling the region’s environmental transformation during the Holocene to be better understood. Recent archaeological and sedimentary data are presented first, and will be combined with new phytolith and speleothem data (further below) to provide a new understanding of northeastern Iraq’s environmental context.
Archaeological data
Gurga Chiya and Tepe Marani are small, adjacent mounds in the southern part of the Shahrizor (Wengrow et al., 2016). They are situated on a Pleistocene terrace approximately 2 km southwest of the large Bronze-Iron Age site of Bakr Awa (Miglus et al., 2013; Figure 1b). As well as preserving the mounds for modern investigation, the mounds’ raised location would have protected them from possible flooding and high rainfall discharge in much earlier periods. Excavated contexts from the two sites have produced calibrated radiocarbon dates from 7570 to 5320 BP (5620–3370 BCE), suggesting intermittent occupation from Late Neolithic to Chalcolithic times. Ceramic evidence from the two sites suggests continuous occupation from the first half of the 6th millennium BCE to the second half of the 4th millennium BCE, although radiocarbon dates do not cover all the evident phases.
The earliest human settlement (c. 7570–7180 BP; 5620–5230 BCE) is documented at Tepe Marani, which appears to have been a small (c. 1 ha) hamlet, bounded to the west by a drainage channel. Toward the end of the site’s habitation, parts of channel feature were filled with debris and paved over with carefully laid potsherds. This channel was a likely former wadi (ravine) course that silted up. This suggests the presence of flowing water directly adjacent to the main occupation area, which may have been a factor in the eventual relocation of human settlement to nearby Gurga Chiya, around the end of the 6th millennium BCE.
The earliest phases of Gurga Chiya have not yet been reached. Investigated deposits yield calibrated radiocarbon dates ranging from 6450 to 5250 BP (4500–3300 BCE; Late ’Ubaid–Middle Uruk periods). Macrobotanical and faunal data attest to an arable economy based on herding cattle, sheep, and goat, with mixed farming of lentils, wheat, barley, fruit, and nuts. The west face of Gurga Chiya preserves a sequence of architectural remains dating to the Late ’Ubaid period (roughly the third quarter of the 5th millennium BCE or c. 6250–6000 BP (4300–4050 BCE)). The character of these remains suggests that drainage was an ongoing, seasonal concern for the residents. Relevant features include a substantial cobbled pathway with raised curbs, built up in a number of phases, and evidence of terracing to raise the level of adjacent buildings (Figure 2).

Western slope of Gurga Chiya showing a cobbled pathway with raised curbs in an area that appears terraced to raise adjacent architecture (Late ’Ubaid period).
Sedimentary data
Little research has been conducted on Quaternary sediments in this area, and is mainly focused on hydrogeological studies (e.g. Al-Basrawi and Al-Jiburi, 2014; Al-Jiburi and Al-Basrawi, 2012; Ali, 2007; Karim et al., 2008) in order to investigate groundwater and surface water sources in the region. To fill in the gap, geoarchaeological surveys of the Shahrizor and adjacent plains were undertaken from 2011 onwards (see Altaweel and Marsh, 2016; Altaweel et al., 2012; Marsh and Altaweel, in press), which included analyses of satellite imagery and topographical and geological maps, as well as offsite geoarchaeological trenching and coring near Gurga Chiya and Tepe Marani (Figure 1b).
To summarize these previous geoarchaeological results, it was found that the sedimentary record was fairly similar across the Shahrizor. Most of the buried sediments were either bluish gravels or silty clays of a dark reddish brown color (5YR4/4 on the Munsell chart), indicating that a paleohydrological regime of channel cutting and siltation across the Shahrizor valley was typical. Figure 3 (Trench 1) shows a typical sedimentation sequence similar to those found in different trenches and cores (Figure 1b: C1–C7): patterns of channel cutting and deposition of sediments over time. This trench provides a useful summary for the region’s sedimentation.

Sedimentary trench (Trench 1) excavated between Bakr Awa and Gurga Chiya/Tepe Marani.
In Trench 1, at about 6 m, a gravel layer was encountered. These gravels were pinkish in color, and thus differed from the more bluish colored limestone gravels found in the upper layers, indicating that the source rock was different. There was also a sharp boundary between this gravel layer and the next silty layer above it, indicating a period of erosion (of unknown time period) between the two depositional events. It is likely that this gravel layer was deposited sometime during the Pleistocene period, with all subsequent layers above the gravel layer dating to the Holocene. The fact that the sediments above the gravel layer represent the Holocene period is validated by pottery found at 5 and 2 m down. Based on this archaeological evidence, the sediments between 5 and 2 m below the surface date from about the Pottery Neolithic (earliest possible date of c. 8450 BP (6500 BCE)) to about 2450–2250 BP (500–300 BCE) or later (Altaweel et al., 2012).
Above the likely Pleistocene pinkish gravels at the bottom of the trench, there was a layer (OST1-1) of reddish brown silty clay, containing iron flecks. Within this layer was a lens (OST1-1a), which differed slightly in terms of the number of carbonate nodules present and because it contained gray mottling. OST1-1 was overlain at about 5 m by a slightly browner (7.5YR4/4), siltier sediment (OST1-2); the boundary between the two was indistinct. OST1-2 contained very few calcium nodules. At about 4.5 m, there is what appears to be a small lens of gravel, just under OST1-3. On the east section (not shown), the gravels are much more extensive, cut into OST1-2 and much more obviously form the bottom of the channel cutting of OST1-3. OST1-3 appears to have some mottling and contains some calcium nodules. It is the same color as OST1-2, and the only difference is the amount of calcium nodules encountered. OST1-2 and OST1-3 are cut into by channels (appearing to be two separate channels), which may be almost contemporaneous, which in turn are overlain by OST1-5. In the east section, there is an additional layer, a fining-up sequence of gravels to sands (OST1-4) just under OST1-5. OST1-5 likely represents the final stage of the fining-up sequence and consists of silty clays. OST1-4 and 5 are both reddish brown in color (5YR 4/3). OST1-5 is overlain by a soil layer. The soil layer is about 1–1.5 m in depth, indicating a regime of environmental ‘stability’ in the more recent period, with less channel cutting across the plain. This suggests not only a shift in hydrology but also a possible reduction in precipitation and lower fluvial discharge. This phase can be roughly dated to after 2450 BP (500 BCE) through the presence of Achaemenid pottery at about 2 m down (Altaweel et al., 2012; Marsh and Altaweel, in press).
Phytolith research
Vegetation communities react to changes in climate and environment driven by both natural variation and human activities. Human modification of the environment obviously has an important impact on the vegetation communities. This is not only reflected in any replacement of plants (i.e. a woodlands being cleared for cereal growing) but also will be reflected in the type of colonizing plants (such as associated agricultural weeds). Analyzing changes in plant communities, as reflected in the phytoliths assemblages, through time, gives indirect evidence of climate, environmental, economic, and land-use change (Rosen, 2005).
Phytoliths (‘plant rocks’) are made within plants and can consist of different types of minerals including silica and calcium oxalate. Silica phytoliths, utilized in this work, are produced by plants: plants take up amorphous silica from the soil via their roots, which is then deposited and polymerized into cells and other recesses within plants (see Piperno (2005) for more detailed discussion). When the plant decays, the hardened silica is deposited in the soil. The phytoliths can potentially preserve well and be extracted easily from the sediments. The climatic conditions in the Middle East are especially conducive for phytoliths research. A higher abundance of phytoliths is produced in high evaporative conditions, such as those found across the region. However, phytolith research is still limited in some regions, including Iraqi Kurdistan. While there has been extensive phytoliths research in the Levant (e.g. Namdar et al., 2011; Ramsey et al., 2016) and Turkey (e.g. Laneri et al., 2015; Ryan, 2011), there has been limited research in Iraqi Kurdistan until recently (e.g. Marsh and Altaweel, in press).
Non-biogenic paleoclimate proxies
Precisely dated and highly resolved climate proxy records are rare in many areas of the Eastern Mediterranean and Middle East, respectively. Figure 4 shows the key paleoclimate records (speleothem and lake/sea sedimentary data) in the Middle East and surrounding region, showing large spatial gaps, with most records deriving from the Levant or Turkey and Iran.

Location of key paleoclimate data nearest to Shalaii Cave.
Paleoclimate records are mainly based on lake sediments from Iran (e.g. Snyder et al., 2001; Stevens et al., 2001; van Zeist, 1966; van Zeist and Wright, 1963) and Turkey (e.g. Dean et al., 2015; Landmann et al., 1996; Roberts et al., 2001; van Zeist and Woldring, 1978; Wick et al., 2003) or marine sediments from the Mediterranean and Red Seas (e.g. Rohling et al., 2015). However, many records suffer from considerable chronological uncertainties due to limitations such as lack of datable material or the so-called ‘hardwater effect’(Arz et al., 2003; Roberts et al., 2011; Rohling et al., 2002; Stevens et al., 2001, 2006). Only a few highly resolved paleoclimate series are available from Iran and Turkey, but the Lake Van, Lake Mirabad, Nar, and Lake Zeribar records have a low temporal resolution (>200 years). The recently published Neor Lake multiproxy record from northern Iran (Sharifi et al., 2015) is a notable exception, both in terms of its dating accuracy and temporal resolution.
More precisely dated records can be obtained from speleothems (e.g. stalagmites and flowstones), which also allow an annual to monthly resolution (e.g. Bar-Matthews et al., 2003; Cheng et al., 2015; Orland et al., 2012). Oxygen (δ18O) and carbon (δ13C) isotopes are the most commonly used climate proxies in speleothems, but δ18O and δ13C calcite values can be influenced by a variety of climatic and environmental effects (e.g. air temperature, rainfall amount, seasonality, moisture source, evaporation, and cave air temperature; summarized in Lachniet, 2009). Importantly, these factors do not necessarily vary in concert, and interpretation of δ18O calcite values often remains ambiguous. Based on published speleothem-based records from the Middle East, δ18O calcite values are commonly interpreted to reflect changes in the amount of rainfall and effective moisture respectively (Bar-Matthews et al., 2003; Cheng et al., 2015; Flohr et al., 2017).
Overall, the present spatial distribution of paleoclimate records from the Middle East is not sufficient to capture the complex climate dynamics in the Middle East, which are the result of major water bodies (e.g. Eastern Mediterranean and Black Sea) and complex topography (e.g. Zagros and Taurus Mountains). The addition of new paleoclimate data from Iraqi Kurdistan, in particular the speleothems from Shalaii cave, will help to fill in some of the gaps in the Near Eastern records, and will also help to increase our understanding of paleoclimate change within the Iraqi Kurdistan region.
Methodology
The archaeological and sedimentary data discussed in the previous section represent work that can be compared and utilized along with the new phytolith and speleothem results presented. We briefly discuss the methods used here (phytolith and speleothem analyses) before presenting new results.
Phytolith analysis
Silica microfossils taken from offsite contexts provide data on vegetation change that could be the result of either or both natural climatic variation and anthropogenic modification of the environment. Phytoliths taken from onsite contexts can provide information regarding crop processing, dietary preferences, and resource use, that is, human activities that may have had an impact on the local environment.
Seventeen samples were taken from Tepe Marani and Gurga Chiya during the 2013 season, which cover the Late Neolithic (Halaf) and Chalcolithic (Ubaid and Uruk) periods, respectively (Table 1). Samples were taken from middens, surfaces, and pottery scatters. Six samples from Gurga Chiya were taken from an offsite context (Trench D). Additionally, 18 samples from Trench 1 that date to the Holocene are utilized along with the new results (Marsh and Altaweel, in press).
List of phytolith and speleothem samples, including locations, dates and contexts, used for this study.
The samples were processed with the protocol developed by Rosen (2005). A subsample of 1–5 g of sediment (more sediment is needed for offsite samples) was sieved at 5 mm, and then treated with a 10% hydrochloric acid (HCl) solution to burn off the carbonates. Clays were then removed, using the settling method (based on Stokes’ Law), and once dried, samples were furnaced at 500°C to remove any organics. Phytoliths were then separated from the sediment, using sodium polytungstate (SPT) and cleaned, dried, and mounted with Merck New Entellen.
Mounted slides were examined under an Alphashot microscope at 400× magnification. Phytoliths were identified and counted (ideally 400 for single celled examples, 100 for multicells), and recorded. After calculating numbers for total phytoliths and phytolith types per gram (Rosen, 2005), histograms (absolute counts and percentages) were created to compare different morpho- and vegetation types across chronologically sequenced samples. Water availability indices (Madella et al. (2009), using Jenkins et al.’s (2011) calculation) were also calculated for the onsite samples at Tepe Marani and Gurga Chiya and the samples from Trench 1 in order to assess the relative availability of water (i.e. soil moisture content) across a temporal scale. Generally, results over 50% suggest relative wetness; the metric is used to compare results in this study with each other.
Speleothem analysis
Two stalagmites (samples SHC-01 and SHC-02; Figure 5; Table 1) were collected from Shalaii Cave (Figure 1a) in 2014. The current cave air temperature at the sampling site is 20.18 ± 0.1°C (measured between June 2014 and May 2015) and relative humidity is 100%. Drip rates at the sampling site vary between 4408 drips and 29,199 drips per day in summer and winter, respectively (Al-Hafeed, 2016), because of the strong seasonality of precipitation at the cave site where approximately 90% of total annual rainfall occurs between October and May (measured at Chamchamal station in the vicinity of Shalaii Cave, monitored between 2002 and 2014).

Analyzed speleothems from Shalaii Cave.
Stalagmite SHC-01 is approximately 33 cm tall and grew between 1012 (938 CE) ± 42 and 494 (1456 CE) ± 29 yr BP. Stalagmite SHC-02 is 31 cm long and was deposited between 8025 (6075 BCE) ± 38 and 6977 (5027 BCE) ± 219 yr BP. Both stalagmites are composed of brownish calcite, whereas areas in the center of the growth axis show signs of recrystallization (Figure 5). Fine, most likely annual growth bands, consisting of couplets of brighter and darker laminae, are occasionally visible in stalagmite SHC-02. Both samples were found broken in the cave and the growth intervals are most likely not related to specific climatic conditions.
Uranium-series (230Th hereinafter) dates for both stalagmites were determined on a multi-collector inductively coupled plasma mass spectrometer (MC-ICP-MS, Thermo-Finnigan Neptune) at the Department of Geology and Geophysics, University of Minnesota. Details of the methods, including standards used for mass fractionation and yield correction can be found in Cheng et al. (2013). For analysis, approximately 200 mg of powder was drilled from the tops and bases of both stalagmites.
The thickness of annual growth bands in stalagmite SHC-02 was measured using high-resolution (optical resolution of 4800 dpi) and the software ImageJ (2017). For stable carbon (δ13C) and oxygen (δ18O) isotope analysis, a total of 65 samples were micromilled continuously at 1 cm increments for both stalagmites. Powdered samples were measured using a Finnigan Delta V Advantage mass spectrometer equipped with an automated carbonate preparation system (Gas Bench II) at the Chemical Analytical Facilities (CAF) at the University of Reading, United Kingdom. Results are reported relative to the international Vienna Peedee Belemnite (VPDB) standard. Analytical errors for δ18O and δ13C are 0.07‰ and 0.06‰ VPDB (1σ-error), respectively (Flohr et al., 2017).
Results
Phytoliths from Tepe Marani and Gurga Chiya
While the preservation of all of the samples was not sufficient to identify genera or species in many cases, as many were fractured and severely dissolved, noteworthy results were derived. Most samples, except Sample GC13E-1522, had an absolute number of phytoliths per gram below 100,000 (Figure 6a). It is likely that the preservation of the phytoliths was negatively impacted by soil chemistry and processes and disturbance. The high phytolith count in GC13E-1522 may reflect a better preservation environment (in a tannur), where waste from cereal processing may have been deposited.

Phytolith results from Gurga Chiya and Tepe Marani.
Onsite samples
Figure 6b shows the ratios of monocotyledons (generally grasses) to dicotyledons (generally trees and shrubs). Monocotyledons usually produce many more phytoliths than dicotyledons (Madella et al., 2009), so it is expected that monocotyledons will outnumber dicotyledons in samples. In some of the onsite samples, dicotyledons make up a relatively greater ratio than in other samples (i.e. TM13A-5003; TM13A-5012). This could be reflecting the use of wood on the site (as building material and well as charcoal or kindling).
Overall, the phytoliths from onsite samples reflect typical assemblages, with a mixture of cereals/grasses, wetland plants, and with some dicotyledons. Figure 6c depicts the relative amounts of wheat, barley, cereals (undetermined), wild grasses/weeds, and unidentified grass husks (‘indet’) from onsite and offsite samples. As mentioned above, many of the multicells, particularly grass husks, could not be identified further than as ‘grass’ (which could be wild, weed, or cereal) or as a cereal of some type (domesticated wheat and barley, but indistinguishable). No barley was identified in the phytolith samples; however, a few examples were found in the macrobotanical samples (Wengrow et al., 2016). As such, it is possible that some of the unidentified cereal husks represent those of barley. For the onsite samples, it is most likely that the wild grasses (which include Avena and Lolium sp.) came in as weeds. Alternatively, these plants could have been used as fodder for animals.
Figure 6d (Wetland plants) compares the numbers of Phragmites australis (common reed) versus sedges. Sedges dominate the assemblages across the time periods. Reeds only make an appearance in two samples, one from Tepe Marani (TM13B-6002) and the other one from Gurga Chiya (GC13F-304). Sedge could have been preferred over reed for use in mats, baskets, and similar items (Wright, 1980). It should, however, be noted that very few Phragmite phytoliths were found in the offsite trench samples (see below).
Figure 6e compares the number of grasses (wild), cereals, wetland plants, and trees/shrubs (dicotyledons). The presence of these plants in the onsite samples reflects the use of different resources at both sites. Most of the dicotyledon phytoliths, such as polyhedrals, jigsaw shapes, and tricomes, come from leaves, with some coming from bark.
A water availability index was also calculated for the onsite samples (Table 2). The percentages were calculated by comparing the number of environmentally driven phytolith morphotypes to genetically produced morphotypes (see Jenkins et al., 2011; Madella et al., 2009). Genetically determined morphotypes, such as dumbbells/bilobes and saddles, are produced, regardless of the amount of water available; however, other types of phytoliths (such as long cells found in leaves) are sensitive to hydrological conditions and will produce more with higher levels of soil moisture (Madella et al., 2009). The percentages are consistently over 50% but with fluctuations. The fluctuations are greater in the earlier Tepe Marani site than at Gurga Chiya, which could indicate somewhat more stable climatic conditions during the earlier Chalcolithic period.
List of potential water availability in the soil as indicated through phytolith analyses.
Offsite samples and Trench D from Gurga Chiya
Samples for phytolith analysis were also taken from Trench D, next to Gurga Chiya, and compared with Trench 1 near Bakr Awa (Marsh and Altaweel, in press; Figure 1b). These phytoliths, while not dated using absolute techniques, do provide general information on the types of vegetation in the region of Gurga Chiya/Tepe Marani throughout the Holocene.
Overall, 18 samples were analyzed from Trench 1 and range in (relative) dates from the early Holocene to the Achaemenid period (or later). The total phytolith count was very low in most samples. Low phytoliths abundance is common in offsite samples because of biogeochemical soil processes, which can fracture and dissolve phytoliths back into soluble silica, unless there is rapid burial of the soil layer (Alexandre et al., 1997; Cabanes et al., 2011; Madella and Lancelotti, 2012). Despite these limitations, notable trends did emerge from the results overall.
Summarizing Trench 1’s results, which are used to compare with Trench D, it is evident that rondels (phytoliths coming from temperate grasses) dominate the short cell record (comparing with bilobes and saddles). This shows that a temperate climate is indicated for the entire Holocene. Wetland plants dominate over the grasses, indicating a much more riverine environment. The wetland plants consist of sedges, primarily; however, some reeds are present in samples P026 and 25. There is also a notable presence of jigsaw phytoliths, particularly clustering around 3–2.5 m in depth (samples P026, 25, 10, and 24), which may be roughly contemporaneous with Gurga Chiya and Tepe Marani. The phytoliths, which derive from dicotyledon leaves, indicate increased water availability (Tsartsidou et al., 2007). Throughout the Holocene, it was found that there is a strong correlation between wetland plants and dicotyledons, with cereals uncorrelated, where much of the environment was riparian. Later in time, particularly after the onset of the Achaemenid period (c. 2450 BP/500 BCE), grasses became even more dominant (Marsh and Altaweel, in press).
Figure 6a–e indicates that the overall total counts for offsite samples (Trench D) are far lower than onsite samples. Figure 6f shows the comparative values of grasses, cereals, wetland plants, and trees/shrubs in the Gurga Chiya offsite context. No cereal phytoliths were found in these samples. The presence of other types of plants reflects a typical riverbank/floodplain environment, similar to the results found in Trench 1 discussed above. Pottery was found in the upper layers of the trench, which may be the result of colluvium or dumping of rubbish from the site.
Water availability indices were also calculated for Trench D and Trench 1 (Table 2). As can be seen, Trench 1 percentages for the most part consistently range from 90% to 100%, with two exceptions, P024 and P018, where the values go down to 50%. Trench D’s results are slightly more varied. The values start at 63% and increase to 95%, then suddenly drop to 54% in sample GC13D-1004.
Speleothem results
Based on linear interpolation between the Uranium-series dates, stalagmites SHC-01 and SHC-02 grew at a high growth rate of 0.637 and 0.296 mm yr−1, respectively. The calculated average growth rate of stalagmite SHC-02 agrees fairly well with the average thickness of 0.416 mm measured on a total of 403 annual bands (Figure 7).

Results from the Shalaii Cave sample.
Oxygen isotope values of stalagmite SHC-01, deposited between 1012 (938 CE) ± 42 and 494 (1456 CE) ± 29 yr BP, range from −6.34‰ to −4.87‰ around an average of −5.65‰. δ18O values of the older stalagmite SHC-02, deposited between 8025 (6075 BCE) ± 38 and 6977 (5027 BCE) ± 219 yr BP, vary between −7.55‰ and −5.77‰ around a mean of −6.54‰, almost 1‰ more negative than SHC-01 (Figure 3).
δ13C values of stalagmites SHC-01 and SHC-02 range from −11.59‰ to −9.07‰ and from −10.05‰ to −7.78‰, respectively. Mean δ13C values of stalagmite SHC-01 are −10.22‰ compared with −8.94‰ of sample SHC-02.
Modern drip water δ18O values in Shalaii Cave (collected once a month between June 2014 and April 2015) average −5.61‰ (VSMOW). Using this drip water value and the modern cave air temperature of 20.2°C, the calculated (after Tremaine et al., 2011) theoretical calcite δ18O value of around −6.05‰ is within the range of the SHC-01 δ18O calcite values, indicating that stalagmites in the inner part of Shalaii Cave were deposited in or very close to isotopic equilibrium due to the high relative humidity of 100% inside Shalaii Cave. The low correlation (r2 = 0.2 for SHC-01 and r2 = 0.1) between δ18O and δ13C values (Figure 7) is further evidence that stalagmites are formed under isotopic equilibrium conditions. Thus, Shalaii Cave δ18O values are, therefore, primarily influenced by variations in δ18O of cave drip water and meteoric precipitation above the cave. Based on previously published speleothem records from the Middle East (Bar-Matthews et al., 2003; Cheng et al., 2015; Flohr et al., 2017; Göktürk et al., 2011; Jex et al., 2010), the amount and seasonality of precipitation and source of moisture (e.g. Badertscher et al., 2011; Bar-Matthews et al., 2003) appear to be the dominant controls for speleothem calcite δ18O values on decadal to millennial timescales, whereas fluctuations in cave air and surface air temperature have a minor or even negligible effect on stalagmite calcite values.
Discussion
Sedimentary, phytolith, and archaeological data
The phytolith results for Tepe Marani and Gurga Chiya are fairly typical for onsite assemblages, consisting of grasses (wild and cereal), wetland plants (mainly sedges), and dicotyledons (bushes and trees). The macrobotanical remains are also consistent with Late Neolithic to Chalcolithic assemblages, from the middle to late Holocene, comprising of cereals, weeds, pulses (lentils, grass pea, and vetches), and flax (Wengrow et al., 2016). There were no real discernable temporal or spatial trends for either the phytolith or macrobotanical assemblages, but they do indicate a continuing temperate climate throughout the period. They also indicate resource use at the sites: crop plants, wetland plants for matting, baskets and similar, and wood/branches, possibly for construction.
Additionally, the crops found in the phytoliths and macrobotanical remains indicate the two typical growing seasons in the Near East: a winter season for the cereals and a summer season for the flax and legumes. The cereals and legumes do lend support to the hypothesis of increased seasonality during this period (Late Neolithic to Chalcolithic) discussed below, with a rainy winter season (November to March) and hot, dry summers (June through September). In previous research across the Shahrizor, evidence of large-scale irrigation channels in sections, cuts, or satellite imagery has not been encountered. It is likely that, as now, that there was ample precipitation to support rainfed or floodfarming techniques in the winter. It was also noted in our survey work (see also Omer, 2011) that there is limited irrigation (using springs) in the summer, to irrigate summer crops such as vegetables, fruit trees, and so on. In the Late Neolithic to early and middle Chalcolithic periods, the precipitation was high enough for rainfed or floodfarming around Gurga Chiya/Tepe Marani. Based on the macrobotanical remains, however, it also seems that the summers may have been very hot, with drought conditions at times: lentils and grass pea, for instance, are both drought tolerant. Generally, these results suggest the region was not directly affected by summer Asian monsoons in the period of the site’s occupation.
The flax (Linum usitatissimum) is an interesting crop, as it grows in spring and summer and requires wettish soils and irrigation. Although this crop seems to counter the argument laid here of increasing seasonality, it is consistent with the environment surrounding the two sites. As discussed below, there was a large river system between Tepe Marani/Gurga Chiya and Bakr Awa, which would have contained areas of marshes. It is possible that the flax was cultivated in these marshy areas, with irrigation during the dry summer months from the river itself.
Returning now to the phytolith evidence, a water availability index was calculated for the onsite samples (Table 2). The values are consistently above 50% throughout the period (Late Neolithic to Chalcolithic periods), suggesting relatively high soil water availability, with some fluctuations, especially during the Late Neolithic, indicating fluctuations in water availability. The average percentage is somewhat higher during the later Chalcolithic of Gurga Chiya (at 71%), that is about 6500–5500 BP (4550–3550 BCE), compared with that of the Late Neolithic/Chalcolithic transition (63%; around 7500–7000 BP (5550–5050 BCE)) at Tepe Marani, which tentatively (given sample size) could indicate that there was more water availability (and thus increased precipitation) during the later period. A recent paper by Clarke et al. (2016) shows climatic variability in the 4th millennium BCE and greater aridity from around 3600–3700 and 3100–3300 BCE in parts of the Near East. While we cannot be sure that this is the case in our results, we do note that samples GC13F-304 and GC13E-1522, which date to around 3600 BCE, might suggest wetter conditions. These onsite phytolith samples, however, likely reflect economic use; therefore, they do not directly clarify the issue of climate change.
The sedimentary and phytolith data indicate a fairly stable, temperate climate, with some evidence of increasing seasonality, with increasing winter rainfall and possibly drought conditions at times during the summer months; this is particularly the case in the Late Neolithic/Chalcolithic transition. The offsite sedimentary and phytolith records indicate that the surrounding environment was one of an anabranching river system, with a riparian environment on the banks and floodplain. There is a presence of both grasses and trees/shrubs, and the environmental conditions were relatively water abundant, at least until the Achaemenid period (i.e. at around 2450 BP/500 BCE). By that period, there is evidence of a hydrology shift, which could be the result of climate change (increased aridity, although conditions are still temperate, as evidenced by the presence of pooid grasses; Marsh and Altaweel, in press). The phytolith results from Trench D were very similar to those of Trench 1, indicating a riparian environment. The upper layers, however, contained pottery and dark organic matter, indicating likely colluvium from the site or possibly purposeful dumping by Gurga Chiya inhabitants, and soil formation processes. This may have been a tributary of the main river channel.
The water availability index for Trench 1 has values that range mainly above 90%, indicating that for the most part, the samples come from channel deposits. There are exceptions, including P024, where the values dip down to about 50%. It may be that this part of the channel became somewhat drier for a short period of time, because of slight channel movement. The results from Trench D are more varied. The bottom of the trench has lower values, around 63%, indicating possibly overbank deposits. The values go up to 95%, and these deposits are likely channel deposits, showing the movement of the channel over time. Then, the values dip back down to 54% in sample GC13D-1004, which could be indicative of the colluvial nature of the sedimentary deposit.
Taken altogether, the evidence indicates a temperate climate with ample rainfall during Gurga Chiya/Tepe Marani occupation periods in the middle Holocene. Archaeological results, including terraced architecture, suggest that episodic flooding and high water levels could have been a major concern for the inhabitants of Gurga Chiya. On the other hand, the macrobotanical remains suggest possible mitigation strategies for drought. The phytolith and sedimentary records indicate there was a riverine system that supported the continued growth of wetland plants and a galleried forest in the vicinity. However, the climate did vary, with increasing winter rains and seasonality, which likely led to some drought summers and limited irrigation. This trend continued, with some variation, throughout most of the Holocene until some point after the Achaemenid period (i.e. around 2450 BP/500 BCE or later), when drier conditions appear to have become more prevalent, based on sedimentary results.
Paleoclimate and other proxy comparisons
Although stalagmites SHC-01 and SHC-02 cover fairly short intervals, they allow us to draw some preliminary conclusions, particularly when compared with other paleoclimate records from the Middle East (Figure 8). The δ18O of the middle-Holocene stalagmite SHC-02 is 1‰ more negative compared with the late-Holocene stalagmite SHC-01, identical to stalagmites from Soreq and Jeita Caves. More negative δ18O values during the early and middle Holocene are also evident in δ18O records from Turkey (Eski Acigöl, Roberts et al., 2011), Iran (Zeribar and Mirabad; Stevens et al., 2001, 2006), Lebanon (Jeita Cave; Cheng et al., 2015), and Israel (Soreq Cave and Negev desert; Bar-Matthews et al., 2003; Goodfriend, 1999) and indicative of enhanced rainfall between ~10,000 and 6000 years ago. The late-Holocene stalagmite (SHC-01) suggests relatively drier conditions, which corresponds to the sedimentary record from Trench 1, although climatic variability is evident, with potentially more pronounced drought. Dust records from northern Iran (Neor Lake; Sharifi et al., 2015) and the northern Red Sea (GeoB 5804-4, Arz et al., 2003) provide supporting evidence for increased rainfall and reduced mobilization of dust during the early and middle Holocene (Figure 8). Unfortunately, stalagmite SHC-02 does not cover the termination of the humid period (Arz et al., 2003) in most parts of the Middle East between 6300 and 5000 years ago. However, pollen-based reconstructions of summer (JJA) and winter (NDJ) rainfall in Lebanon (e.g. Chamsine; Cheddadi and Khater C, 2016; Figure 8) suggest fairly constant rainfall and enhanced seasonality until approximately 2000 years ago.

Comparison of Shalaii Cave with other regional proxies.
While there is fairly consistent evidence for substantial increase in precipitation during the early to middle Holocene in the Middle East, it remains uncertain whether seasonality (winter-spring precipitation versus summer drought) was higher or lower during this period. The presence of annual layers in stalagmite SHC-02 suggests a highly seasonal climate with one rainy season, which is supported by the occurrence of annual growth bands in several stalagmites from the Middle East (e.g. Fleitmann et al., 2003; Fleitmann et al., 2004; Flohr et al., 2017). There is, thus, clear evidence in northern Iraq for a highly seasonal climate between at least 8025 (6075 BCE) ± 38 and 6977 (5027 BCE) ± 219 yr BP. Possibilities for the early Holocene include minimal seasonality (e.g. Dean et al., 2017) or dry springs and summers and wet winters (Lewis et al., 2017; Wick et al., 2003). It has been suggested that the weakening of the Indian Summer Monsoon may have coincided with increasing rains evident by the middle Holocene (~6300 cal. BP) in neighboring Anatolia and NW Iran (Djamali et al., 2010). On the other hand, climate model experiments (Brayshaw et al., 2011) suggest that summer precipitation did not increase substantially in northern Arabia and from Syria to Iran during the early and middle Holocene as the Intertropical Convergence Zone and the associated monsoonal rainfall belt were located south of these areas. This is also in good agreement with the interpretation that longer and possibly more severe summer droughts may have delayed the distribution of deciduous oak in the Middle East, which occurred approximately 3000 years later than the onset of the humid period.
Conclusion
Integrating the various proxy results, spanning archaeological, sedimentary, phytolith, and speleothem data, the benefits of using multiple proxies are indicated. These records suggest relatively wet and temperate conditions spanning parts of the middle Holocene. Late-Holocene sedimentary, phytolith, and speleothem records indicate that the onset of drier conditions likely occurred over the last 2500–2000 years, although it was still wet enough for rainfed agriculture. We recognize that further work is needed to better understand our existing trends and to more fully understand environmental change in other periods. More phytolith samples are needed from better preserved contexts, while analyses of further speleothems are needed to complete the Holocene sequence. Nevertheless, results presented here are unique to this part of the Near East, as multiproxy data are rarely used in regions such as Iraq. These results demonstrate how multiple proxies complement each other and help support conclusions for the region of analysis. We now have a better understanding of climate conditions in the northeastern part of Iraq, a key area in the development of agriculture and urban areas with a high-precision dating source. Shalaii Cave appears to have an abundance of other samples that span other periods within the Holocene, which we think makes it a potentially important cave in demonstrating the region’s climatic history.
Footnotes
Acknowledgements
We like to thank the British Institute for the Study of Iraq for funding parts of this research. We also thank Professor Larry Edwards from the University of Minnesota and his laboratory for dating our speleothem samples.
Funding
The author(s) received no financial support for the research, authorship, and/or publication of this article.
References
Supplementary Material
Please find the following supplemental material available below.
For Open Access articles published under a Creative Commons License, all supplemental material carries the same license as the article it is associated with.
For non-Open Access articles published, all supplemental material carries a non-exclusive license, and permission requests for re-use of supplemental material or any part of supplemental material shall be sent directly to the copyright owner as specified in the copyright notice associated with the article.
